Gene Rpal_1540 details

Gene Information

• Locus tag: Rpal_1540
• ID: 6409197
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1625741
• End bp: 1627792
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642711434
• Product: Fusaric acid resistance protein conserved region
• Protein accession: YP_001990549
• Protein GI: 192289944
• COG category: [S] Function unknown
• COG ID: [COG1289] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTAT TCGACCACAG CGGCCGCGAG GCGCGGCTTT TCTGGCACGG CTTGCGGCAG 
GCGGCGCTGT TGCGGCTCCA AGCGTTGGCT CCCCGTGTGC TGTTCGGTCT GCGCTTGTCG 
GCCTCGGTCT GCCTCGCGCT GTTCGCCACC TATTATCTCG AATTGCAGAA CGCGTTCTGG 
GCGGCGACGA CGGCGGCGAT CGTTTGCCAG CCCAATCTCG GCGCATCGAT CCAGAAAGGT 
CGCTTTCGCG CGATCGGATC GGCGCTCGGC GCTCTGGTCA TGGCGGCGCT GCTGGCCGCG 
TTTCCCCAGC AGCGCGAACC GGCGTTGCTG TTGCTCGCGC TATTCTGCGG TCTGTGCGCG 
GCCGCCGCCA CATTGCTGCG CAATCTGGCG GCCTACGCGG CGGCGCTGGC GGGCATCACC 
AGCGCCATCA TCTTCGCCGA CACCGTGACG GATCCATCCT CGGCTCCCTT CCTCGCGATC 
GTCCGTGTGG GCGAGATCTA CATCGGCATC TGGTCATCCT CTGTCGTCGC GATGCTGACC 
GGCTCCGGGT CAGCCCGGCG ACAGCTGTGC CAGACACTCG GCCGGATCTC GGCGAATCTC 
CTCGCTGGTT TCTCCACGGA TGTCACCTCC GGTCGCGCTG CCGCTGAAAG TCGTACCGCA 
CGCATCGCCC TCGCGCGCGA GTTTGGCCCG CTCAATCTCG CCATCGACGC AGCCTTGGGT 
GAGCAATCGC CAGTTCTCGT CGATCGCGCT CGGTTGCGCC GAATTCCGTT TGCACTGTTG 
GATGCACTGA CCAGCTGGCG AAATGCGGCT CGTTTCGGCG AGCGGTCCAG CGTGGCGGAG 
GCTACCAGCC TCGGCGAGCT GCGCGCCTCG CTCGCTGCAA TCGATCCGGC GCGATTCCAG 
AGCGATCCGG CGGGCTTCCG GGATAGCTGC CGCACCACGC TCGGCCGCAT CGACGCGACG 
CGGAGTAGCG ATGTCGACGC GCCGATCGTG GTTGCGGCTC GCGACGTCGT CCAAGGCCTC 
GCCGCAGCGG CCGACGGCAT GTTGGCCGAG GGGACTGTTG GTAGCAAAGG CGCGAAGCGG 
CGGGCTTTCT TCGTTGTCGC CGACCCGCTG CCAGCGCTGG TGAACGGGGC CCGGACAGCC 
GCGGCGATCC TCGCGATCAC CTGTTTCTGG GTGTTGACGG CCTGGCCGTC GGGGCCGTTT 
GCGATCGTCT TTACCGCGGT CGCTACGCTG ATTTTCGCCT CGTTCGGAGA CCACGCGGGT 
GATCTCGCTA AGGACTACAC GATCGGCGTC GCACTGATGG CCGTGGTAGG AAGCGTGCTC 
TATTTCTGCG TGCTGCCGGC GCTATCGAGC TTCGCGGCGC TGATCGCCGT GCTGTCGGTG 
CTGTTCATCG TGCTCGGCGT GATGCAAGCG GGGCCGTGGC ACAGCGTCGT CTTCCTGGCG 
ATGACGATCT CGTCGCTGCC GCTGCTCGGC GTCGGAAACC CGATCACCTA CGACGCTTCG 
GCGTATTTCA ATCTCGCGCT GGCGATCGTG TCCGGAAGTG CGGTGGGAGC GATGTTCTTC 
GTCGCCATCC CGGTTGTGCC GCCGAGCCTT CGGCTGCGCC GCTTGATCGC TCTCTCGCTG 
CGCGATCTGC GTCGGCTGCT GTCGCTTCGG AGTACGCCCG ATCGGCTTCG TTGGACAGCG 
CTGATGGCGC GGCGCATCGA GCTTCTGCCG TCGAAGGCGA CGGCGGACGA CGTCGCCGAT 
CTGCTCGCGC TCCATGCAGT CGGTCGTGCA GCTCTCCGCC TCGAGCAAGA GGTTTCGGGC 
GATCGCGCGC TGAGTCTGCT CCGAGCCGCC CTGACGGCGC TTGCCGATGG CCATTTGGCG 
GACGCGCGGA TGATGCTGGT GACATGGCGC GGCCAGAGCC TCGCGCTCGA TCCGCCCGAC 
GATGCGGAGC ACCGGCGCTG GATCGCCAGC CAGTCCCACA TCGCCGTCAT CATCGACGCG 
ATCGACAACC ATCCAGTGCT GCTGGCGACT CCGTTCCGTG GCTGGCAGCC GTTCTTCAAT 
GCATTCAGGT GA 

 

Protein sequence

MSVFDHSGRE ARLFWHGLRQ AALLRLQALA PRVLFGLRLS ASVCLALFAT YYLELQNAFW 
AATTAAIVCQ PNLGASIQKG RFRAIGSALG ALVMAALLAA FPQQREPALL LLALFCGLCA 
AAATLLRNLA AYAAALAGIT SAIIFADTVT DPSSAPFLAI VRVGEIYIGI WSSSVVAMLT 
GSGSARRQLC QTLGRISANL LAGFSTDVTS GRAAAESRTA RIALAREFGP LNLAIDAALG 
EQSPVLVDRA RLRRIPFALL DALTSWRNAA RFGERSSVAE ATSLGELRAS LAAIDPARFQ 
SDPAGFRDSC RTTLGRIDAT RSSDVDAPIV VAARDVVQGL AAAADGMLAE GTVGSKGAKR 
RAFFVVADPL PALVNGARTA AAILAITCFW VLTAWPSGPF AIVFTAVATL IFASFGDHAG 
DLAKDYTIGV ALMAVVGSVL YFCVLPALSS FAALIAVLSV LFIVLGVMQA GPWHSVVFLA 
MTISSLPLLG VGNPITYDAS AYFNLALAIV SGSAVGAMFF VAIPVVPPSL RLRRLIALSL 
RDLRRLLSLR STPDRLRWTA LMARRIELLP SKATADDVAD LLALHAVGRA ALRLEQEVSG 
DRALSLLRAA LTALADGHLA DARMMLVTWR GQSLALDPPD DAEHRRWIAS QSHIAVIIDA 
IDNHPVLLAT PFRGWQPFFN AFR