| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1531 |
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| Symbol | |
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| ID | 6409188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1615272 |
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| End bp | 1617002 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711425 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001990540 |
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| Protein GI | 192289935 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.885242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGG TTGCAGATCG TATCGTCGAG ACTCTTCATC AAGCGGGCGT CCGGCGCATC
TTCGGCGTCG TTGGAGACAG CCTCAACGGC CTCACGGAAG CGCTGCGCGA GCACGGCGGA
ATTCAATGGG TGCACGTCCG CCACGAGGAA GTCGCCGCCT TCGCCGCCGC CGGCGAATCC
CAGATCACCG GCGAGCTCGC GGTCTGCGCC GGCTCCTGCG GCCCGGGCAA TCTGCATCTC
ATCAACGGTC TGTACGACGC GCAAAGGACC CGCACGCCGG TGCTGGCGAT CGCGGCGCAA
ATCCCGTCCG CCGAGATCGG CGGCGGCTAT TTCCAGGAGA CGCATCCGCA GAATCTGTTC
CGGGAATGCA GCGTGTATTG CGAGATGGTC ACCGATCCGC ATCAGTTCGA CTACGTCATC
GAGAATGCAA TCCGCGCCGC GATCGGCCGT CGCGGCGTCG CCGTCGTAGT CATCCCGGGT
GATGTGGCGT TGCACGAGGC GTCATCGCGC GGCGTGTCGC CGGTCTCGGG CCTGCTGCCG
CCGGCGCCGG TCGTCACGCC CGGCGAGCCG GAGATCGAGG CGTTGGCAAC TCTGCTCAAC
GATGCCGGCA AGGTCACGCT GTTCTGCGGA CGCGGCTGCG CCGGCGCGCA CGACGAACTG
ATGGCTCTGG CCGAAGCGCT GAAGAGCCCG ATCGTTCACG CACTCGGAGG CAAGGAGTAC
GTCGAATACG GCAACCCCTA CGACGTCGGC ATGACCGGTT TCATCGGCTT TTCGTCGGGC
TATGAAGCGA TGCACGCCTG CGACGTGCTG GTGATGCTGG GCACCGACTT CCCGTACAAG
CAGTTCTTGC CGGGCGATGT GAAGATCGCC CAGGTCGATC TTCGCGCCGA ACATCTCGGC
CGCCGCTGCA AGCTCGACCT CGGCGTCGTC GGCGGCGTCC GCGAAACCAT CGAAGCGCTG
TTGCCCAAAC TGACGACCAA GACCGATCGG GGCCACCTCG ATCACTGCGT TGCGCACTAC
GTTTCGGCCC GAGAGGGTCT CGACGATCTC GCCAAGGGCA CGCCCGGGCA CAAGCCGATC
CATCCGCAAT ATCTCGCCAA GCTGATCAGC GACAGCGCCG CCGAGGATGC GGTGTTCAGC
TTCGACGTCG GCACGCCGAC GATCTGGGCG GCGCGCTATC TGAAGATGAA TGGTCGTCGC
CGCCTGATCG GCTCCCTCGC GCACGGCTCG ATGGCGAACG CGCTGCCGCA GGCGATCGGC
GTCCAGGCGG CGCAGCCGGG CCGGCAGGTG ATCTCGCTGT CGGGCGACGG CGGCTTCACC
ATGCTGATGG GCGACCTGAT CACACTGACG CAGATGAAGC TGCCGGTGAA GGTCGTGATC
TTCAACAACG GCGTGCTTGG CTTCGTGGCA CTGGAGATGA AGGCGGCCGG CTTCGTCGAG
CTCGGCACCG ATCTGCAGAA TCCGGACTTC GCCGCGATGG CGCGGGCGGT GGGCATTCAC
GGCGTTCGGG TCGAGGACCC CGGTGACCTG CCGGCTGCGG TGGCCGAGTT TCTCGCTCAC
GACGGCCCCG CCGTGCTCGA TGTCGTCACC GCCAAGCAGG AACTGTCGAT GCCCCCGACT
ATCGGCGCCG AGCAGGTCAA GGGCTTCAGC CTGTGGCTGG TCCGCGCGGT GATGAGCGGG
CGCGGCGACG AAGTGATTGA TCTCGCCAAA CAGAATTTGT TGCCCCGCTA G
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| Protein sequence | MPKVADRIVE TLHQAGVRRI FGVVGDSLNG LTEALREHGG IQWVHVRHEE VAAFAAAGES
QITGELAVCA GSCGPGNLHL INGLYDAQRT RTPVLAIAAQ IPSAEIGGGY FQETHPQNLF
RECSVYCEMV TDPHQFDYVI ENAIRAAIGR RGVAVVVIPG DVALHEASSR GVSPVSGLLP
PAPVVTPGEP EIEALATLLN DAGKVTLFCG RGCAGAHDEL MALAEALKSP IVHALGGKEY
VEYGNPYDVG MTGFIGFSSG YEAMHACDVL VMLGTDFPYK QFLPGDVKIA QVDLRAEHLG
RRCKLDLGVV GGVRETIEAL LPKLTTKTDR GHLDHCVAHY VSAREGLDDL AKGTPGHKPI
HPQYLAKLIS DSAAEDAVFS FDVGTPTIWA ARYLKMNGRR RLIGSLAHGS MANALPQAIG
VQAAQPGRQV ISLSGDGGFT MLMGDLITLT QMKLPVKVVI FNNGVLGFVA LEMKAAGFVE
LGTDLQNPDF AAMARAVGIH GVRVEDPGDL PAAVAEFLAH DGPAVLDVVT AKQELSMPPT
IGAEQVKGFS LWLVRAVMSG RGDEVIDLAK QNLLPR
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