| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1526 |
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| Symbol | |
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| ID | 6409183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1607535 |
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| End bp | 1609511 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711420 |
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| Product | bicupin, oxalate decarboxylase family |
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| Protein accession | YP_001990535 |
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| Protein GI | 192289930 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
[COG3619] Predicted membrane protein |
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| TIGRFAM ID | [TIGR03404] bicupin, oxalate decarboxylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACAT CAGCCAAACC TCAACCGATC CGCGGCAGCT ACGGCGCCGA CGATCCCGGC
CCGCGCAATA TCGAACTCGA TCTGCAGAAC CCCGATATTC TCATTCCGCC GCCAACCGAC
AACGGCTCGA TCCCGAATCT GAAGTTCTCG TTCGGCATGG CGCACAACCG GCTCGAAGCC
GGCGGCTGGG CGCGCGAAGT CACGGTCCGG GAATTGCCTG CGGCCAAGGG TATGGCTGGC
GTCGACATGC GCCTCGGCCC CGGCGTGGTC CGTGAGCTGC ATTGGCACAA GGAGGCCGAA
TGGGGCTACG TGCTCGAGGG CCGCTGCCGC GTCACCGCCG TCGATGCCGA TCGCGGCGTC
TTCGTCGACG ACCTGAAGGC CGGTGACATC TGGCTGTTTC CCTCCGGCAT CCCGCATTCG
ATCCAGGCGC ACGCGGAAGG CTGCGAGTTT CTGCTGGTGT TCGACGACGG CAACTTCTCC
GAGAACGAGA CGCTGCTGGT GACCGAGCTG ATGGCGCACA TGCCGATCGA GGTCGTCGCC
AAGAACTTCG GCATCCCGGC GACGCATTTC GCCAATCTGC CGCCGAAGGA AAAGTACATC
TTCCCGCTGC CGGTGCCGCC GCCGCTCGGC GAGGTGATGG CGAAGCTGCC GAAGAACCGC
CCTGCCATGC CGTTCACGGT GCACGGCGGC GACTTCACGC CAACGCAGTG GGACGGCGGC
AAGACCACGG TGATCGACGT CCGCAACTTC CCGGTGACCA ACATGGCAGC GCTGATCATC
GATCTCGAGC CCGGCGCGCT CCGCGAGATT CATTGGCACC CCGACGCCGA CGAATGGCAA
TACTACATCC AGGGCGAGGC CCGGATGACG GTGTTCGACG CCACTTCCAA GGCGCGGACG
TTCAACTATC GCGCCGGCGA TGTCGGCTAT GTGCCGAAGA CCCTCGCGCA CTACATCGAG
AACATCGGCA CCACGCCGGT GCGCGTGCTG AACGTCTTCA ACAAGCCTCT GTTCAAGGAC
GTTCCGCTCA ATCAGTGGCT GGCGCTGACA CCGCCGGATC TGGTGCGCGG CCACCTCGAG
CTCGACGACA TCGCGATGGC GGCGCTCAAT CCAAACCCAC GTTCCGTGAC GCGCTGGCAC
CGGGCGAGCC CGACTGATGC CTGCGTGCGA AATAATCGCG CGCAAGCATC GTTGGTTCTC
GTCCGAGTGC GGAGCCGACA TCCAGAGAGA GTGGCCACGA TGCCGTCGGA TGCCGACATG
GCAGCAGCGC TGGAGACCGC GAACGGTGCC GGCGCAAGGT CGATGCTCCA CGGCGTGTTT
GCACTGTCGC TGACGTGCAT GGCGGGATAC CTCGACGCCG TGGGCTACAC CCATTTGGCC
GGCCTGTACG TCTCGTTCAT GAGCGGCAAC AGCACCCGCC TGGGCATTGC GATTGCCAAA
GGCGATCGGG AGCTCTTGGT GCCCTGCGTC GTGGTGATCA TCGGATTCGT CGCAGGCGCA
TTCATCGGAT CGTTGATAGC TAACGCCGTT AGTCGCTTCA AGCTGACTGC GGTCCTGGCC
ACGGAGACCG CCCTGCTGCT GTCGACGATC GCTCTGAGCC TCGACACCAC AAGCTACGCC
GCGCTGCTTC CGATCTGCGT CGCGATGGGT ATTCAGAACG CCGCTCATGA GACGATCGCC
GGCGCCGAAC TCGGCAAGAG CTTCATCACC GGCTTTCTGT TCAATCTCGG CAAGGCTCTG
GCACATCTGG CTCAGGGCCG AGGAGGCGCG GCTCGGGCGC TGGCCTATGG CGCCTCATGG
AGCGCCTTTC TCCTCGGCGT CGTTCTGGGC ACCCTGGCAC TGGGATATTT CGGCCTGATC
GACGCACTGT CGGGGGCCGC TGGGGTGCTG TTGGCTCTCG CAATCGGCGC GGCGTCCGAC
CAGTTCGACC CGCCGAACCC GATCGCCGAC TCACGGCGGC GGTCGACCAG CCCGTAA
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| Protein sequence | MPTSAKPQPI RGSYGADDPG PRNIELDLQN PDILIPPPTD NGSIPNLKFS FGMAHNRLEA
GGWAREVTVR ELPAAKGMAG VDMRLGPGVV RELHWHKEAE WGYVLEGRCR VTAVDADRGV
FVDDLKAGDI WLFPSGIPHS IQAHAEGCEF LLVFDDGNFS ENETLLVTEL MAHMPIEVVA
KNFGIPATHF ANLPPKEKYI FPLPVPPPLG EVMAKLPKNR PAMPFTVHGG DFTPTQWDGG
KTTVIDVRNF PVTNMAALII DLEPGALREI HWHPDADEWQ YYIQGEARMT VFDATSKART
FNYRAGDVGY VPKTLAHYIE NIGTTPVRVL NVFNKPLFKD VPLNQWLALT PPDLVRGHLE
LDDIAMAALN PNPRSVTRWH RASPTDACVR NNRAQASLVL VRVRSRHPER VATMPSDADM
AAALETANGA GARSMLHGVF ALSLTCMAGY LDAVGYTHLA GLYVSFMSGN STRLGIAIAK
GDRELLVPCV VVIIGFVAGA FIGSLIANAV SRFKLTAVLA TETALLLSTI ALSLDTTSYA
ALLPICVAMG IQNAAHETIA GAELGKSFIT GFLFNLGKAL AHLAQGRGGA ARALAYGASW
SAFLLGVVLG TLALGYFGLI DALSGAAGVL LALAIGAASD QFDPPNPIAD SRRRSTSP
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