Gene Rpal_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1477 
Symbol 
ID6409134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1557848 
End bp1558645 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content67% 
IMG OID642711376 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001990492 
Protein GI192289887 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3931] Predicted N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.385339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCG TGCGCGATAA TTTCCTCAGC CTCGATGCCG GAGAACCTCC GGTGATCGAG 
CGCAATCAGA ACGGACAGTC GCCGTTCCTG CTGGTGTGCG ACCATTACGG CCGCCAGATT
CCGGCGCAGC TCGGCGACCT CGGCCTGCCC GAAGCCGAAC TGACGCGTCA CATCGCCTGG
GACGTCGGCA TCGCCGGTGT CGCCGAGCGG GTGTCCGATG CGCTCGGCGC GCATCTGATC
GCGCAGCGCT ATTCGCGGCT GGTGATCGAC TGCAACCGGC CGCCGAGCGC CGAGAGTTCG
ATCCCGCTGG TCAGCGAAGC GACCACGATC CCCGGCAATG ACGGGCTGTC TCGCGAGCAC
GCCGCGGAGC GGCGGCGGCT GATCTTCGAT CCGTATCACC AGCGGATCGA GGCCGCGATC
GAGGACCGAC AATTGTCCGG CCAGCCGACC GTGCTGCTGG CGCTGCATTC GTTCACGTCG
GTGTATCACG GCATGGCGCG GCCCTGGCAC ATCGGCACGC TGTATCAGGA CTGCACCGTG
CTGCCGCCAC TGCTGCTCGC CGAGCTGCGC CGCGAGCCGG ATCTGGTGGT CGGCGACAAT
CAGCCCTATG CGGTCTCGGA CGGCACCGAC TACACCATTC CGGTGCACGG CACCGCACGC
GGCCTGATCA CCTCGGGCAT CGAAATCCGC CAGGATCAGA TCACCGACGA GGCCGGCCAG
GTCGAATGGG CCAGCCGGCT CACCCGCGTG CTGAGCACGA TCGCCGATAC ATTCCGGCAA
CAGCAGGCGC TGCGATAG
 
Protein sequence
MDGVRDNFLS LDAGEPPVIE RNQNGQSPFL LVCDHYGRQI PAQLGDLGLP EAELTRHIAW 
DVGIAGVAER VSDALGAHLI AQRYSRLVID CNRPPSAESS IPLVSEATTI PGNDGLSREH
AAERRRLIFD PYHQRIEAAI EDRQLSGQPT VLLALHSFTS VYHGMARPWH IGTLYQDCTV
LPPLLLAELR REPDLVVGDN QPYAVSDGTD YTIPVHGTAR GLITSGIEIR QDQITDEAGQ
VEWASRLTRV LSTIADTFRQ QQALR