| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1473 |
|---|
| Symbol | |
|---|
| ID | 6409130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1555234 |
|---|
| End bp | 1556082 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642711372 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001990488 |
|---|
| Protein GI | 192289883 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5473] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCT CCGGTAAGGT TGATCCCGTG GTGCGGCCGA TTACGATCGG AGACATCGCG
GAAGCGTTGG GTCAGGGCCT GCGCGATTTC CAAGCCGCGC CTCTGTACGG GCTGGCGTTC
GGTGCGTTCT ATGCGGCGGG CGGATTGTTG ATCCTCGCCT GTCTCACTGC CTTCCACATG
GTGTATCTGG CCTATCCGCT CGGGGCAGGC TTTGCGCTGA TCGGGCCGTT CGTCGCGCTC
GGCCTGTACG AGGTCAGCCG GCAGCGTGAG GCCGGCAAGC GGCCGTCTTT GCTGCAGATC
GTCGGCCTGA TGCGAAGCCG CAGCGAGCTT GGCTGGATGG CGTTCGTGAC GCTGTTCCTG
TTCGTGATCT GGATGTACCA GGTCCGTCTG CTGATCGCGC TATTCCTTGG CGTCGGCGCG
TCGTTCGGCA GCCTGCAGGA GTTCATCTCG GCGGTGCTCA CCACCAACGA GGGGCTGGTG
TTCCTGGCTG TCGGCAATTG CGTTGGCGCC TGTCTGGCCC TGGTGCTGTT CTCGTTGACG
GCGGTATCGT TCCCGCTGCT GCTCGATCGG GACGTCGATT TCGTCACCGC GATGGTGACC
AGCGTCCGCG CGGTGGTGAA GAGCCCGCTG CCCATGATCG GATGGGCCGC CACCATCGTG
GTCTTGCTGG CGCTCTCAGC GCTGCCTTAT TTCCTCGGGC TGGTGGTGAC GTTGCCGGTG
CTCGGTCATG CCACCTGGCA CCTGTATCGC AAGATCGTTG CGCCGGTCGC GGCTGAACTT
CCCGACACCG CCGATACCGA GGCGAGCAAC AACGTCGTGG CGATGCCCAA GCGCGCCGCG
ACAGGCTGA
|
|---|
| Protein sequence | MSISGKVDPV VRPITIGDIA EALGQGLRDF QAAPLYGLAF GAFYAAGGLL ILACLTAFHM
VYLAYPLGAG FALIGPFVAL GLYEVSRQRE AGKRPSLLQI VGLMRSRSEL GWMAFVTLFL
FVIWMYQVRL LIALFLGVGA SFGSLQEFIS AVLTTNEGLV FLAVGNCVGA CLALVLFSLT
AVSFPLLLDR DVDFVTAMVT SVRAVVKSPL PMIGWAATIV VLLALSALPY FLGLVVTLPV
LGHATWHLYR KIVAPVAAEL PDTADTEASN NVVAMPKRAA TG
|
|---|
| |