| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1390 |
|---|
| Symbol | |
|---|
| ID | 6409047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1463350 |
|---|
| End bp | 1463760 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642711289 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001990405 |
|---|
| Protein GI | 192289800 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCGA TTCTAATCGG TGCCTCGCTC GGCGGCTGCG GCATGAACGG ACGCGACGGG
GCCTTTGCCC AGATGGACAG CAGCGACTTC ACCGGCTCGA TCGCCGCCGT GCTGCCGGCC
CGCGAGGATG GCCCGACCGA CGCCGATATG GCGCTGGCGC GGATCGCCGC CTCCGACGTG
CTCACCAAAG GCGACAAGGA TTCCAGCCAG CCGTGGGAGA ATCCGACCAC CGGCGCGCGG
GGCTCGGTGA CGCCGCTGGC GGCCGCCTAC AGCAACGAAG GCCGCACCTG CCGCGACTTT
CTCGCCTCCT ATGTGAAGGA GCGGACCGAG AGCTGGATGC AGGGCGCGGC GTGCCGGACC
ACGCAGGGAC ATTGGGAAAT CCGCTCGCTG CGGCCGTGGC GTAAGAGCTG A
|
|---|
| Protein sequence | MIAILIGASL GGCGMNGRDG AFAQMDSSDF TGSIAAVLPA REDGPTDADM ALARIAASDV
LTKGDKDSSQ PWENPTTGAR GSVTPLAAAY SNEGRTCRDF LASYVKERTE SWMQGAACRT
TQGHWEIRSL RPWRKS
|
|---|
| |