| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1372 |
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| Symbol | |
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| ID | 6409029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1445149 |
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| End bp | 1446003 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711271 |
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| Product | HAD-superfamily hydrolase, subfamily IIA |
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| Protein accession | YP_001990387 |
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| Protein GI | 192289782 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.193178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGT TGCGTTTCGT CGAGCATCTG CACGAGCTCG TCGGCTCGGT CGACGTTGTG
CTCAGCGACA TCTGGGGCGT GGTGCACAAC GGTCTGGAGT CGTTCCCTGA CGCCTGCGCG
GCGCTGAAGA CCGCGCGCGA TCAAGGCCGC ACCGTCGTGC TGATCACCAA TGCGCCGCGG
CCTGCGGATT CGGTGCAGCG CCAGCTCCGC AAGCTGGACG TGCCGGACGA TTGCTACGAC
GCGATCGTGT CGTCGGGCGA TCTCACCCGC ATCTATGTGG CCGAGCATCC CGGACAGTCG
ATCTACTGGC TCGGCCCGGA CCGCGACAAT TCAATCTATC GCGGCCTCGA CGCGGTGCTG
ACGCCGCTCG AAAAGGCCGA TTACATCATC TGCACCGGGC CGTTCGACGA CGAAACCGAG
TCGGCCGAAG ACTATCGCGA GATGATGGGG CAGGCGCTGG AGCGCAAGCT GACGCTGGTC
TGCGCCAATC CGGACATCGT GGTCGAACGC GGCGACCGGC TGATCTACTG CGCCGGCGCG
ATCGCCGAAC TGTATCGCGA GCTCGGCGGC GATGTGATCT TCTACGGCAA GCCGCATCGG
CCGATCTACG ACCGGGCGAT GGCGTTGGCG CGCGAGATCC GTGGCGTCGA CACGCCCGTG
CAGCGGGTGC TGGCGATCGG CGACTCGGTG CGGACCGATC TTGCCGGCGC GCAGGGCTAC
GGCATCGATC TGCTGTTCGT CACCCGCGGC ATCCATGCCG ATGCGTTCGA GGGGATCGAC
CGGCTCGACA CCGCCGCGGT GAACGAATTG TTCGGCCACC CGCCGCTGGC GCTGACCCGC
GAGCTGCGCT GGTAG
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| Protein sequence | MTTLRFVEHL HELVGSVDVV LSDIWGVVHN GLESFPDACA ALKTARDQGR TVVLITNAPR
PADSVQRQLR KLDVPDDCYD AIVSSGDLTR IYVAEHPGQS IYWLGPDRDN SIYRGLDAVL
TPLEKADYII CTGPFDDETE SAEDYREMMG QALERKLTLV CANPDIVVER GDRLIYCAGA
IAELYRELGG DVIFYGKPHR PIYDRAMALA REIRGVDTPV QRVLAIGDSV RTDLAGAQGY
GIDLLFVTRG IHADAFEGID RLDTAAVNEL FGHPPLALTR ELRW
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