Gene Rpal_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1320 
Symbol 
ID6408977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1388365 
End bp1389039 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID642711219 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001990335 
Protein GI192289730 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTACC GGCGAACCCA CCAGGTGGTT AAGCGCTTAG CAGCGCGCCG CAGCGCTATC 
CTTGCTGCAG CGCGTGAGAC CGCCGCCGAA GGCGGAATGG CCGCGGTGCA GATCGCGCCG 
GTGGCAGCGC GTGCCAAGGT CGCCGCAGGC ACCGTGTACC GTTACTTTCC CTCCAAAGCC 
GATCTGATTT CGGAACTCAT CGCCGACGTC TCGCGTGACG AGCTCGCAGC GATCCGCCGT 
GCAGCCGACG CAGCGCCCGG GCCGTCTTCA GCACTGGCGG CAGCGGTCAC CACGGTCGCG 
GTGCACGTAT TGTCTCATCG CAAGCTGGCG TGGGGCATCT TGGCGGAACC CGTCGATGTC 
GATGTGTCCG CCTCACGGCT CGCCAGTCGC CGTGAGATCG CCGGCGAGAT CGAATTGCGG 
ATCACTGCCG CGGTGCGCGC CGGCCATCTG CCTGCGCAAG ACACCGCGCT CGCTTCGACC 
GCGCTGCTTG GCGCGGTGCA CGAATCGCTG GTGGGACCGC TGGCGCCGGA CAATCTCGAC 
GACCCGGCGA AACTCCGTGA TGCGGTGCAA ACCGTCACGC TGCTGGCGCT TCGTGCGGTC 
GGGGTGATGG ATGCCCGCGC CCGAGGCCTC GTGGTTCAGG CGGTGGTACC GCCGCGTAGT 
CTGGTCGGGG CCTAA
 
Protein sequence
MVYRRTHQVV KRLAARRSAI LAAARETAAE GGMAAVQIAP VAARAKVAAG TVYRYFPSKA 
DLISELIADV SRDELAAIRR AADAAPGPSS ALAAAVTTVA VHVLSHRKLA WGILAEPVDV 
DVSASRLASR REIAGEIELR ITAAVRAGHL PAQDTALAST ALLGAVHESL VGPLAPDNLD 
DPAKLRDAVQ TVTLLALRAV GVMDARARGL VVQAVVPPRS LVGA