Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1297 |
Symbol | |
ID | 6408954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1366875 |
End bp | 1367423 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642711196 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001990312 |
Protein GI | 192289707 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGACC GAGCCACCCT GCTGCCGCTG CTTGGCGAAG TATTTCGGAC CCACGGCTAC GAAGGGGCGT CGCTGGCGCT GATCACCGAG GCGACGGGGC TCGGCAAGGG CAGCCTGTAT CACTTCTTCC CCGGCGGTAA GAAGCAGATG GCCGAAGAGG TGCTGGCCGA GATCGACGGC TGGTTCGAGG CCCACATCTT CGCGCCGCTG CGCGATCCGT CCGATCCCCC TGCCGCCATC GCGGCGATGC TCTCGGGCGT GGACGAATAT TTCCGCTCGG GTCGTCGCGT CTGCTTGGTC GGGGTGATCG CGCTCGGCCA TGCGCGCGAT GAGTTCGCCG CGCCGGTGAA TGACTATTTC GCTCGCTGGC AGGACTCGCT GGCGGCAGCG CTGCGCCGCT GCGGAGTGTC GGCCGCCGCG GCTCGGCGCC GTGCCGAGGA TGCGGTGCTG TCGATCCAGG GCGCCCTGGT GCTGGCGCGC GCGCGCAACG ACGCGGCCGT GTTCACCCGT GCGTTGTCCG AACTGAAGGC GCGACTGCTG GCTGCGTAG
|
Protein sequence | MKDRATLLPL LGEVFRTHGY EGASLALITE ATGLGKGSLY HFFPGGKKQM AEEVLAEIDG WFEAHIFAPL RDPSDPPAAI AAMLSGVDEY FRSGRRVCLV GVIALGHARD EFAAPVNDYF ARWQDSLAAA LRRCGVSAAA ARRRAEDAVL SIQGALVLAR ARNDAAVFTR ALSELKARLL AA
|
| |