| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1246 |
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| Symbol | |
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| ID | 6408902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1322045 |
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| End bp | 1323661 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642711144 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_001990261 |
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| Protein GI | 192289656 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CGCCCGAGTT CGCACATCTT GGCGTCCATG GTGACGTCGT TATCGTCGGC
GGCGGTCTCG CCGGACTGTT CTGCGCGCTG AAATTGGCGC CGCGGCCGGT GACGCTGATC
AGCGCCGCAC CGCTCGGCGA AGGCGCCTCC ACTGCCTGGG CGCAGGGTGG CATCGCCGCG
GCTGTCGGCG AAGGCGACAG CGCCGAATCG CATGCGGCCG ACACCATCGC GGTCGGCGCC
GGACTGGTCG ACGAGGCGGT GGCGCATCGC CTCGCCGGCG AAGCCGCCGC ACGCATCCAC
GATCTCCTCA GCTACGGCGT GCCGTTCGAC CGCGACCTCG AAGGCCGGCT GGCGGTCGCG
CGCGAGGCGG CGCATTCGGC GCGGCGCATC GTCCACGTCC GCGGCGACAT GGCGGGCCAG
GCGATCATCA GCGCGCTCAC CGAAGCGGTG CGCAACACGC CGTCGATCAA AGTGATCGAA
GGCTGGTTCG CCGACGGGCT GCTGATGCAC GACGACGCGG TCGCCGGACT GCGGCTGCGC
AAGGTCGGCA ACGCCGCCGG CGCGCCGATG CACATCGCCG CACGTGCCGT GGTGCTCGCC
ACCGGCGGCA TCGGCCATCT GTATGCCGTC ACCACCAATC CGATCGAGGC CCGCGGTGTC
GGGCTGGCGA TCGCGGCCCG CGCCGGCGCG CGAATCGCCG ATCCGGAATT CGTGCAGTTC
CATCCGACCG CCATCATGGT CGGTCGCGAT CCGGCGCCGC TCGCCACCGA GGCGCTGCGC
GGCGAAGGCG CGATCCTGAT CAACGGCCAA GGCGAACGCT TCATGCTGGC CGCGCATCCG
CTCGCCGAGC TGGCGCCGCG CGACATCGTT GCCCGCGGCG TGTTTGCCGA AGTCGCCTCC
GGCCGCGGCG CCTATCTCGA CGCCACCAAG GCGCTTGGCG CGCATTTCGC CGAGCATTTC
CCGACCGTGT ACGAGAGCTG CATCTCGGCA GGCATCGATC CGGCGACACA GCCGATCCCG
ATCGCGCCGG CGGCGCACTA CCATATGGGC GGCATCGCGG TGGACATGCG TGGCCGCAGT
TCGCTGCACG GGCTGTGGGC GGCGGGCGAA GTGTCCTGCA CCGGCGCGCA CGGCGCCAAC
CGGCTCGCCT CCAACTCGCT ACTTGAAGCC GTGGTGTACG CGGCGCGGAT CGCCGAGGAC
ATCGCCGGCA CCGAACTCGC CGCGACCAAG TCGCGGCTCG ATGTGCACGA GACACACAGC
ACGCCGATCG ATCCAGCGCA GGAGCTGCTG CTGCGCCAGA CCATGGCCGG CAAGGTCGGC
GTGGTCCGCG ACCGCGACGG ACTGACCGAA GCGGTGCGAA CTTTCGCGGC ACTCGAAGCC
GAGACCTCGT CGACTACGCT CGCCAATATG GCGACGACCG CGCTGCTGGT CGCCACCGCA
GCGCTGGCAC GCACCGAAAG CCGGGGCGCG CACTACCGCG CCGACTATCC GACCGAAAAC
CCGGCGCAGG CGAAACGCAC CACCACCTCG CTGGCTCAGG CCCGCGAGCG CGCCGCCGCG
CTCGGCGGCG GTGCCCCGCG CTCCCCTCGC CTCTCTGCGC AATCCGCGCT CGCCTGA
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| Protein sequence | MSTTPEFAHL GVHGDVVIVG GGLAGLFCAL KLAPRPVTLI SAAPLGEGAS TAWAQGGIAA
AVGEGDSAES HAADTIAVGA GLVDEAVAHR LAGEAAARIH DLLSYGVPFD RDLEGRLAVA
REAAHSARRI VHVRGDMAGQ AIISALTEAV RNTPSIKVIE GWFADGLLMH DDAVAGLRLR
KVGNAAGAPM HIAARAVVLA TGGIGHLYAV TTNPIEARGV GLAIAARAGA RIADPEFVQF
HPTAIMVGRD PAPLATEALR GEGAILINGQ GERFMLAAHP LAELAPRDIV ARGVFAEVAS
GRGAYLDATK ALGAHFAEHF PTVYESCISA GIDPATQPIP IAPAAHYHMG GIAVDMRGRS
SLHGLWAAGE VSCTGAHGAN RLASNSLLEA VVYAARIAED IAGTELAATK SRLDVHETHS
TPIDPAQELL LRQTMAGKVG VVRDRDGLTE AVRTFAALEA ETSSTTLANM ATTALLVATA
ALARTESRGA HYRADYPTEN PAQAKRTTTS LAQARERAAA LGGGAPRSPR LSAQSALA
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