| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1228 |
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| Symbol | |
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| ID | 6408884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1298515 |
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| End bp | 1299345 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642711126 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001990243 |
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| Protein GI | 192289638 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCCG ATCCCGCGCC GAGCCTGCGT CAATTGCTCG CGTTCTATCT GGACGCAGGG
GTGGATTGCG CGCTGGCCGA GGGTCCGGTC AACCGGATGC TCGACGATGC GCCAGACCCC
GCGGCGCGCG AGGCGGCGCC CGAGCCGCGC CCGATCGTCA AGCCTGCCTT GCACGCCAAG
CCGCCCCCAC CGCTGGCGTT CGGTGCGCCG CCTGCGAGCC CGGACGCCGC CATCATCTCG
GCGCGCGAAG CCGCCGCGAC CGCGCCGACC CTGGAAGCGC TGCGCGAGCT GATGCAGCGG
TTCGACGGCT GCGCTTTGCG CGCGACCGCG ACCCAGCTGG TGTTCGCCGA CGGCAATCCG
CAGGCCAAGG TGATGTTCGT CGGCGAAGCG CCCGGCCGCG ACGAGGACAT CGAAGGGCTG
CCGTTCGTCG GCCGCTCCGG CAAGCTGCTC GACCTGATGT TGGCAGCGAT CGGACTGAAC
CGCGGCAACG TCTACATCGC CAACGTGATC CCGTGGCGTC CCCCGGGCAA CCGCACGCCG
ACGCCGCAGG AGACCCAGAT CTGCCTGCCG TTCATCCGGC GCCAGATCGA GCTGGTGAAC
CCGGACCTGC TGGTGACGCT CGGCAACCCG TCGACCCAGG CGCTGCTCGG CACCCGCGAC
GGCATCATGC GCACCCGCGG CCGCTGGTTC GACTACGACA CCGGCACCCG CACCATCCGC
GCTCTGCCGA CGCTGCATCC GGCCTATCTG CTGCGCCAGC CAACCTACAA GCGGCTCGCC
TGGCAAGATC TGCGCGCGAT CGCCACCGCG CTCGCCGCGA CGTCCAACTA A
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| Protein sequence | MTPDPAPSLR QLLAFYLDAG VDCALAEGPV NRMLDDAPDP AAREAAPEPR PIVKPALHAK
PPPPLAFGAP PASPDAAIIS AREAAATAPT LEALRELMQR FDGCALRATA TQLVFADGNP
QAKVMFVGEA PGRDEDIEGL PFVGRSGKLL DLMLAAIGLN RGNVYIANVI PWRPPGNRTP
TPQETQICLP FIRRQIELVN PDLLVTLGNP STQALLGTRD GIMRTRGRWF DYDTGTRTIR
ALPTLHPAYL LRQPTYKRLA WQDLRAIATA LAATSN
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