| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1212 |
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| Symbol | |
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| ID | 6408868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1280787 |
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| End bp | 1281782 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711110 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001990227 |
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| Protein GI | 192289622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATGC GATGGACGAT GAGCGGCGCG GTCGCCGCAT GGCTGCTCGG AGCAGTGGCG
GCGCATGCCG CGGCGACGCT GACGGTGGCG GAGACCAGGA TCTCCGACGA GAAAGCGGTG
TTCGCCACCG TCGAGAGCAT CAGCGTGGTG CCGGCGCGCG CGCGGATCGG CGGCACGGTG
GTGGCGCTGA AGGTGCGTGA AGGCGACAGC GTCACCCGCG GCCAGGAGAT TGCAGCCATC
GGCGACGACA AGCTGACGCT GCAGATGAAC TCGCTCGACG CCCAGATCCA GGCGCTGCAG
GCACAGGCGA CCCAGGCGCA GATCGACTAC GATCGCACCT CGGGTCTGGT CGAGCGCGGC
ACGCTGCCGC GCACCAAGCT GGATGAGGCA CGTACCGCGC TCAACGTTGC CGAGAACAAT
CTGCGCGCCA AGACCGCGGA ACGGTCAGTG GTGCAGCAGC AGTTCAAGGA AGGCCAGGTG
CTGTCGCCGG ACGACGGCCG CGTGCTGAAG AAGATGATTA CGGTCGGGTC GGTGGTGCTG
CAGGGCGATC CGATCGTCAC GGTGGCGCAG CAGCACTACA AGCTGCGGCT GCGGGTGCCG
GAACGGCACG CCCGCTTCCT CAAGGCCGGC GACAAAATTC GGGTCGACGG CAGCGAGTTC
GGCGATCAGG TGGCGAAATT CGGCACGATC GATCTGGTGT ATCCGCAGAT CGAGGACGGC
CGCGTCGTCG CCGATGCCAC TGTCGATGGA CTGCCGCAGT ATTTCGTCGG CGACCGGCTG
CGGGTGTGGA TTTCCGGCGG CGAGCGCTCC GCCTTCGTGA TCCCGGCGAA GTTCATCGCT
ACCGAATTCG GCATCGACTA CGTGCATCTC GGCGAGCCCG GCAAGACCAT GGCGGTGCCG
GTGCAGCGTG GCCGCGAGCA TCCCACGCAG GAGATGCCGG ACGGTCTCGA AATCCTGTCG
GGCCTGCGTC CCGGTGACAG GCTGGTGCAG CCGTGA
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| Protein sequence | MRMRWTMSGA VAAWLLGAVA AHAAATLTVA ETRISDEKAV FATVESISVV PARARIGGTV
VALKVREGDS VTRGQEIAAI GDDKLTLQMN SLDAQIQALQ AQATQAQIDY DRTSGLVERG
TLPRTKLDEA RTALNVAENN LRAKTAERSV VQQQFKEGQV LSPDDGRVLK KMITVGSVVL
QGDPIVTVAQ QHYKLRLRVP ERHARFLKAG DKIRVDGSEF GDQVAKFGTI DLVYPQIEDG
RVVADATVDG LPQYFVGDRL RVWISGGERS AFVIPAKFIA TEFGIDYVHL GEPGKTMAVP
VQRGREHPTQ EMPDGLEILS GLRPGDRLVQ P
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