Gene Rpal_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1203 
Symbol 
ID6408859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1274485 
End bp1275138 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID642711101 
ProductDSBA oxidoreductase 
Protein accessionYP_001990218 
Protein GI192289613 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTCA GCGTCGATCT GTTCTGGTCG TTTCGTAGCC CCTACAGCTA TCTGTCATTG 
CCCAAGGCGG TGAAGCTGGT CGAGCAATAC GATTTCGTCA TCACCGCACG GCCGGTGTAT 
CCGCTCGCGG TCCGCGACCC GACGTTCTTC AAGCGCACCG ATCCGAGGTT CGCGCGCTAC 
GTCGTGCTCG ACAGTTTTCG CGTGGCGCAG AAGGAGGGGA TTCCGTTCCG CTTCCCGCGG 
CCCGATCCGA TCGTGCAGAA CATGCAGACG CTCGAAGTCG CTGCCGAGCA ACCCTACATC 
ACCCGCCTGA CGCGGCTCGG CGCTGCTGCA CAGCTCGCCG GCCATGGCCT GGCGTTCATC 
CGCGAAGTCA GCTTCGTGCT GTATGGCGGC GCGGTCGACA ATTGGCACGA AGGCGATCAT 
CTGGCCAAAG CCGCCGAGCG GGCCGGGCTC GATCTGGCGC AACTCGAGGC GGAGATCGCC 
GCCGATCCCG ACCGATACGA TGAGACCATC CGCAGCAACG AGCGCGATCA CGCTGCGTCG 
GGCCACTGGG GCGTGCCGAC CTTCGTGTTC AAGGGCGAGC CGTTCTTTGG CCAGGACCGG 
CTTGATCTGT TGCTGTGGCG CCTGCAGCAG CATGGGCTGA AGGAGCGGGA CTGA
 
Protein sequence
MSLSVDLFWS FRSPYSYLSL PKAVKLVEQY DFVITARPVY PLAVRDPTFF KRTDPRFARY 
VVLDSFRVAQ KEGIPFRFPR PDPIVQNMQT LEVAAEQPYI TRLTRLGAAA QLAGHGLAFI 
REVSFVLYGG AVDNWHEGDH LAKAAERAGL DLAQLEAEIA ADPDRYDETI RSNERDHAAS 
GHWGVPTFVF KGEPFFGQDR LDLLLWRLQQ HGLKERD