| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1179 |
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| Symbol | |
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| ID | 6408835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1250865 |
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| End bp | 1251863 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711077 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001990194 |
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| Protein GI | 192289589 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCT TGTCCGTCAC CGCTGCGCCC TCGGCCTGGG CCGGTCTCCG CAACGACCTG
ATCGCCGCCG CGGTGATCGC CGTGCTCGGG GCGATCGGGT ACTTTGTCTA TCCCGACGAT
CTCGCCTTCC TGATCCGCGT GATCGGGCTG GCGTTCCTGG TGATCTCGCT CGACCTCGTC
ACCGGCTATT GCGGCGTCGC CACGCTCGGC CATGCCGCGC TGTTCGGCGT CGGCGCCTAT
GCGGCCGGGA ATTTCTGTCT CGCCGGCGTT ACCGATCCGA TCCTGATGCT GCTGATTGGC
GCGCTGGCTG GTACCGCCAC CGGGCTCGTC TCGGGCCTCT TGGTGACGCG TTTCCGCGGC
CTGCCCCAAC TCGTGCTGTC GATCGCGTTC GGCCAACTGG TCGCCGCGCT CGCCAACAAG
CTGTCGTCGA TCACCGGCGG CAGCGACGGC CTTGCCGGCA TTTCGCCGAG CCCGGTGTTC
GGCATCTTCA ACTTCGATAT GTTCGGCCGC ACCGGTTACG TGTTCTCGGT GATCGTGCTG
CTGGTCACGA TGGTGACGCT GCTTCGCTTC GCCCGCTCGC CGTTCGCGCT GCTGTGCCGT
GCCATCAAGG ACGACACGCT GCGGACCCGG ATGATCGGCG TCTCGGTGTA TCCTCGGCTG
GTGGTGATGT ACTGCGTGGC CGGTGCGGTC GCCGGGCTCG GCGGAGCGCT GACCGCGATC
AACACCGGCG TGGTCGGGCT CGACAGCGTC AGCTTCGAGC GCTCGGCCGA AGCGCTGATC
ATGCTGATCC TCGGCGGTGC CGGCAATCTG TGGGGCGCGT TGATCGGTGC GATCCTGTTC
GAGCTGTTTC ACCACTACGT CTCGACCGCG AGCCCGTTCC ACTGGATGAT CCTGGTCGGT
GTGTTGCTGA TCGTGGTGGT GCTGTTCTTC CCAAAGGGGC TGGTCAACGA AGTGACCCGG
CGGATCGGCG ATTTCAGGCA GGCGAGGGCG GCGCGATGA
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| Protein sequence | MATLSVTAAP SAWAGLRNDL IAAAVIAVLG AIGYFVYPDD LAFLIRVIGL AFLVISLDLV
TGYCGVATLG HAALFGVGAY AAGNFCLAGV TDPILMLLIG ALAGTATGLV SGLLVTRFRG
LPQLVLSIAF GQLVAALANK LSSITGGSDG LAGISPSPVF GIFNFDMFGR TGYVFSVIVL
LVTMVTLLRF ARSPFALLCR AIKDDTLRTR MIGVSVYPRL VVMYCVAGAV AGLGGALTAI
NTGVVGLDSV SFERSAEALI MLILGGAGNL WGALIGAILF ELFHHYVSTA SPFHWMILVG
VLLIVVVLFF PKGLVNEVTR RIGDFRQARA AR
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