| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1178 |
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| Symbol | |
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| ID | 6408834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1249996 |
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| End bp | 1250862 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711076 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001990193 |
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| Protein GI | 192289588 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGACGA TTCTCGGAAT CCTGCCGGAC GCGCTGGCCT ACGGCATGGT GCTGTTCACG
ATCTCGATCG GCCTGTCGAT CATGATGGGC TTGATGCGCG TGGTCAATCT CGCACACGGC
GCATTCGCGA TGATCGGCGG TTATCTCGCC TCGTTCGCGC TGGTTTCGCT CGGCGTTTCC
TATCCGATCG CGATCCTGAT CGCGGTGATC GGCGCGGTCA TCATCTCGGT CCCGTTCGAG
TTCCTGCTGT ATCGGCGGAT CTATCGCCGC TCCGACGAAC TGACCCAGAT CCTGCTGACG
ATCGGCATCA CCTTCTTCAT CGTCGGCATC GCCAACTACA TCTTCGGGCC GACTTCGAAG
CCGATCCCGC TGCCGGAGAT GCTGAAGGGG CCGTTCGATC TCGGCTTCCG CATGATCCCG
GCGCACCGGC TATTCGTGAT CGGCTGCGGC GTGGTCACCG CGGTGGCGCT GTGGCTACTG
ATCGAGAAGA CCGAGTTCGG CGTGCGGCTG CGCGCGGCGG TCGACAATGG CGACATGGCC
GAGGCGCTCG GCATTCGCAC CCAAATTGTC TATTCGGTCA CCTTCGCGCT GGCGGTGGGG
CTCGCGGCGT TTGGCGGCGT GGTCGGCGCT GAGCTGCTGC CGGTCGAGCC GTTCTACGCG
CTGCGCTACA TGGTGACGTT TCTGGTCGTG GTGTCGGTCG GCGGCGCCGG CTCGGTCACC
GGTGCGATGG CGGCGTCGCT GTTGCTCGGC CTTGCCGACA CCACCGGCAA ATATCTGGCG
CCGGAGTTCG GCGAGTTCTT CTTCTATGTC GCGGTGATCG TCATCGTTTA CGTGTTCCCG
CACGGCCTGT TCGGAAAGGC GCACTAG
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| Protein sequence | MRTILGILPD ALAYGMVLFT ISIGLSIMMG LMRVVNLAHG AFAMIGGYLA SFALVSLGVS
YPIAILIAVI GAVIISVPFE FLLYRRIYRR SDELTQILLT IGITFFIVGI ANYIFGPTSK
PIPLPEMLKG PFDLGFRMIP AHRLFVIGCG VVTAVALWLL IEKTEFGVRL RAAVDNGDMA
EALGIRTQIV YSVTFALAVG LAAFGGVVGA ELLPVEPFYA LRYMVTFLVV VSVGGAGSVT
GAMAASLLLG LADTTGKYLA PEFGEFFFYV AVIVIVYVFP HGLFGKAH
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