Gene Rpal_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1138 
Symbol 
ID6408794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1208034 
End bp1208864 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID642711038 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_001990155 
Protein GI192289550 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCGGC GCCTGGTCGC CAGGCCGCCG TACACCCCGG CCGGCGGGCC GGAGGTCCGG 
ACCGGCATTA TGCTCGACAT AGAGACCACC GGCCTCGACC ACAGCACGGA CGAGATCATC
GAGCTCGGCA TGGTCAAGTT CGACTACTCG GCGGAGGGAC GGATCCTCGG CGTCAGGGGC
ACCTTCTCCG CATTCAACGA GCCGTCGGTG CCGATCCCGC GGGAGATCAC CGCGATCACC
GGCATCACCG ACGGGATGGT GGCGGGCCAC GGGTTCGATG TCCATGCTGT CGCGGCGTTC
GTCGACGACG CGGTCATCGT CATCGCGCAC AACAGCGGCT TCGACAGGAA GTTCGCCGAA
CGCTACTGGC CGGTGTTCGA GCATCGGGCA TGGGCCTGCA GCGTGACCGA GGTCGATTGG
GGGGCGCATG GTTTCGCGGA CGCGCAGCTC GGCTACCTGC TCAACGGCGC CGGCTTCTTC
CACCAGGCTC ATAGGGCCGT CGACGACTGC CATGCACTGC TGGAAATCTT GGACTTCACG
CTGCCAACGA CCGGCGCGCC GGCGCTGGCG CTGCTGCTCG ACAACGCCCG CAAGCCGACG
ATGCGGGTCT GGGCCGAGCA GTCGCCATTC GAGCTCAAGG ACTCGCTCAA AAAACGGGGC
TACCGTTGGA ATGACGGCAG CGACGGCAGA CCCAATTCCT GGTTCATCGA CGTCGACGAG
GCCGCCCTCG ACGGTGAGAT CGCGTTCCTG CGGACCGAGA TCTACATGAG CGACGTCGAG
CCTAGCGTGC AGCGGCTTAC CGCGTTCACG CGGTTTTCGA GCCGGGTCTA A
 
Protein sequence
MLRRLVARPP YTPAGGPEVR TGIMLDIETT GLDHSTDEII ELGMVKFDYS AEGRILGVRG 
TFSAFNEPSV PIPREITAIT GITDGMVAGH GFDVHAVAAF VDDAVIVIAH NSGFDRKFAE
RYWPVFEHRA WACSVTEVDW GAHGFADAQL GYLLNGAGFF HQAHRAVDDC HALLEILDFT
LPTTGAPALA LLLDNARKPT MRVWAEQSPF ELKDSLKKRG YRWNDGSDGR PNSWFIDVDE
AALDGEIAFL RTEIYMSDVE PSVQRLTAFT RFSSRV