Gene Rpal_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1134 
Symbol 
ID6408790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1204986 
End bp1205711 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID642711034 
Productprotein of unknown function DUF159 
Protein accessionYP_001990151 
Protein GI192289546 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCAATT TGTATTCGAT CACCACCAAT CAGGCCGCCA TCAGCGCTCT GTTTCGCATC 
GTCAATCGCT ATGTCGGCAA CCTCGCGCCG ATGCCCGGTG TGTTTCCGGA CTACAAGGCG
CCGATCGTCC GGACGGGCGT CGAAGGACGC GAGCTCGCGA CCGCGCGGTG GGGCATGCCG
TCGTCATCGA AGGCGTTGAT GGACGCCACC AAGAAGCGTG CGGAGAAGCT GCAGGCGAAA
GGCAAGACGG TTGATTTCAA GGAATTGCTC CGCATGGAGC CGGACGGCGG CACCACCAGC
ATTCGGAACG TGAAGAGCAA ACACTGGACG AGGTGGTTGG GTCCGGAGCA CCGCTGCGTG
GTGCCGTTCA ACTCATTCAG CGAGTTCAAC AAGGCCGAGG GCGGCGACAT CTGGTTCGCG
CTCGACGAGA CCCGCCCGCT CGCCTGCTTC GCCGGCATCT GGACGAACTG GACGTCCGTG
CGGAAGGTCA AGGAAGGCGA GACCACGAAC GACCTCTACG CATTCCTGAC GACGGAGCCG
AGCGCCGAGG TGAGCGCCAT CCACCCGAAG GCGATGCCCG TGATCCTGAC GACGCCAGAT
GAAATCGACA CTTGGATGAC CGCCCCGGCG GACGAGGCGC TCAAGCTGCA GCGACCGCTG
CCGGACGGGA CGCTGCGGAT CGTTGCCCGC GGCGTGAAGG AGGATGCCCC AAACAGGACG
ATCTAA
 
Protein sequence
MCNLYSITTN QAAISALFRI VNRYVGNLAP MPGVFPDYKA PIVRTGVEGR ELATARWGMP 
SSSKALMDAT KKRAEKLQAK GKTVDFKELL RMEPDGGTTS IRNVKSKHWT RWLGPEHRCV
VPFNSFSEFN KAEGGDIWFA LDETRPLACF AGIWTNWTSV RKVKEGETTN DLYAFLTTEP
SAEVSAIHPK AMPVILTTPD EIDTWMTAPA DEALKLQRPL PDGTLRIVAR GVKEDAPNRT
I