Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1134 |
Symbol | |
ID | 6408790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1204986 |
End bp | 1205711 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711034 |
Product | protein of unknown function DUF159 |
Protein accession | YP_001990151 |
Protein GI | 192289546 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCAATT TGTATTCGAT CACCACCAAT CAGGCCGCCA TCAGCGCTCT GTTTCGCATC GTCAATCGCT ATGTCGGCAA CCTCGCGCCG ATGCCCGGTG TGTTTCCGGA CTACAAGGCG CCGATCGTCC GGACGGGCGT CGAAGGACGC GAGCTCGCGA CCGCGCGGTG GGGCATGCCG TCGTCATCGA AGGCGTTGAT GGACGCCACC AAGAAGCGTG CGGAGAAGCT GCAGGCGAAA GGCAAGACGG TTGATTTCAA GGAATTGCTC CGCATGGAGC CGGACGGCGG CACCACCAGC ATTCGGAACG TGAAGAGCAA ACACTGGACG AGGTGGTTGG GTCCGGAGCA CCGCTGCGTG GTGCCGTTCA ACTCATTCAG CGAGTTCAAC AAGGCCGAGG GCGGCGACAT CTGGTTCGCG CTCGACGAGA CCCGCCCGCT CGCCTGCTTC GCCGGCATCT GGACGAACTG GACGTCCGTG CGGAAGGTCA AGGAAGGCGA GACCACGAAC GACCTCTACG CATTCCTGAC GACGGAGCCG AGCGCCGAGG TGAGCGCCAT CCACCCGAAG GCGATGCCCG TGATCCTGAC GACGCCAGAT GAAATCGACA CTTGGATGAC CGCCCCGGCG GACGAGGCGC TCAAGCTGCA GCGACCGCTG CCGGACGGGA CGCTGCGGAT CGTTGCCCGC GGCGTGAAGG AGGATGCCCC AAACAGGACG ATCTAA
|
Protein sequence | MCNLYSITTN QAAISALFRI VNRYVGNLAP MPGVFPDYKA PIVRTGVEGR ELATARWGMP SSSKALMDAT KKRAEKLQAK GKTVDFKELL RMEPDGGTTS IRNVKSKHWT RWLGPEHRCV VPFNSFSEFN KAEGGDIWFA LDETRPLACF AGIWTNWTSV RKVKEGETTN DLYAFLTTEP SAEVSAIHPK AMPVILTTPD EIDTWMTAPA DEALKLQRPL PDGTLRIVAR GVKEDAPNRT I
|
| |