| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1124 |
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| Symbol | |
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| ID | 6408780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1191554 |
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| End bp | 1195534 |
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| Gene Length | 3981 bp |
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| Protein Length | 1326 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642711025 |
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| Product | hypothetical protein |
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| Protein accession | YP_001990142 |
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| Protein GI | 192289537 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGG ACACCCGAAA CGCCATCGAA CGTGCGACCC AGAAGATCCG GCGGATCCTC
CAGGAGGATT TCGCCGAACA GTTGGACGGC GTGTTCGACG TGCGCTCCGA CGGTCGGGTC
GCCGAAGAGG GCGGCCGTCA CCTCTCTGGA CGTCAACTCC TGCTGCGCGA TCGGATCGTG
GCGGCCGTCG AACACAAGCG CCGAGCCGGT ATGCAGCCGA CCGACGCCGT GCGGGACTAC
ATCCGTGACG CCGCCTTCAC CACTCTGAAC CGCTTCGCCG CGCTCAAGAT GCTCGAGCCG
CGCGGGCTTG TGCAGGAGTG CATTAGCCGC GGCGAAAATT CGATCGGATT TACGGAGTTC
TGCGGCCTGG CGCCGGGGCT GAAGACCGTC GACGGAGCCG GCTATCGGCT CTACATCGAG
AGCATTTTCG ACGAACTGTC TACGGAGGTG AAGGTTCTGT TCGACAGACG GGATCCGGCG
TCCGCGCTTT GGCCGAGAAA GGCCGCTTTC GATGAAATTC TCGAAATCCT GAACGGCTCC
GGCCTAGTTG GAGTGTGGAA CGAGGATGAG ACGATCGGCT GGATCTATCA GTTCTTCAAT
TCGGGCGAAG AGCGTCGGCA GATGCGTGAG GAAAGTCAGA CGCCACGCGA CGGTCGAGAA
CTCGCGATCC GGAACCAGTT CTTTACGCCC AACTATGTCG TCCGCTTTCT TGCTGAAAAC
AGCCTGGCGC GCATCTGGTG GGAGATGCGC CGTGGCGACA CACGGATTCT CCTAGAAAGC
GAATATCTAG TATGCGAATC ATTCGACCTC GATCAAGCGG CCGGAATGTC TGCCGATCAA
CCTCGTACGA AGAAGGATCC TCGATCGCTC GGCGCGATTG ATCCCGCATG CGGTTCGGGT
CACTTCCTGC TCTATCTTTT CGGCCTTTTC TTGATGATCT ACGAAGAGGC CTGGCACGAT
CTTGATGCTC CAACGTTCCA GGGAAGTGGC CGCACGTTGC GAGAAGATTT CCCCGAACTC
GAAGAATTCC GGAAGGCGAT GCCAGGCCTT ATCCTGCGAT ACAATCTTTT CGGGATAGAT
ATCGACTTTC GCTGCGCTCA AATCGCTCAA CTCGCGCTTT GGATGCGAGC CCAACGGGCG
TTCAAGGAGA TGAATGTCTC GAGGGCGGCA CGTCCGCGTA TACGCCGCGC GAATATCGTG
ATCGCAGAGC CAATTCCGGG CGATGCACCT CTGATCGAAA ACTTTGCCTC GACCCTCAAG
CCGGCCGCCC TCGGGACGCT CTTCAAGGGG ATCGTCGCCG AGCTGAATCA CGCCGATGAG
ATGGGAGCGC TTCTTCCTCT CGATCGTACA CTCGCGTCAC TCATTGACGA AGCGAACAAA
TCTATTTCGC AGGCTCGGGA GAAGGGAAAG CAGGCGACGC TTCCCGGTTT CGACGAACAA
CGTGCTGAAT CCGTTCGTTA CGTGGATTTG CGGGGATTCT CTTCATTTCA AGAAGCGGAA
GCCCTACTGA AGGAGTCGCT CGAAGAGTTC TTGATCAATG CGGTGAACGG CATCGGAGTG
CGGCGTCGCC TTTTTGTAGA CGACGCAGAG CAGGGGCTCG CGTTAGTGGA TCTTATGAAT
CGTCATTACG ACGTAATCGT TATGAATCCC CCCTTCGGCA CTCCTTCGGA CGGGGCTCGA
GAGCGCATAG CGGCTGAGTA CCCGCAAACT AAGTATGATT TGGGGGCAGC GTTCGTAGAC
GAGTGGAGAA ATCGCCTCAC CCCCCGTGGA CGCCTTGGCG TCATATTCAA CCGGACAAAT
TGGTTCTTAA GCCGGCTGCA GCACTTTCGC TCTCGCCTGT TGGAAAGATC ATGGTTGGCC
TGCAACGCGG ATCTTGGCTT GGGTGTGCTG GACGCGTTTG TCGAGACGGC CATGACAGTC
ATCGAAAATG GGCCGCAAGA AAAAAGGCAG TCTATCTGGT TTCGGCTTAC AGAAGGGGGA
GATCGCGAAG GGAATCTCCG CCGCTTCGTC CGTGACGTAA ACTCACGTTC AGTGACATCG
AACACATTTA TCCACCCGCA GAGCGCGTTC GAGAACATCG CCGGCAAGGC GTTCTCATAT
TGGCTGTCGC CGGCTCTGCT GCACATTAAA GAGCTCACGC CGCTCACCGC TTCTGGAATC
GAAGCTAAAC AAGGATTGGC CACCAAAGAT AACTTTCGCT TTTTGCGGCT ACACTGGGAA
CTCAAGCAGA ATGGCGAGCG ATGGAAGTTA TACTCGAAAG GAGGAGCTTA TGCTCCTTTG
GTCGGCCTCT ATCATCTAGT TATTGATTGG GGTGCGGCGG CTTCTGCCGC ATACGCAAAT
CGAGACGGGC AGTTCTGTTG CCTTCTGACC GGACAGGCCC ATAAGTATGC TTTCCGGCCA
TGCATAACTT ATTCTCAGCG GACTTCTCGT TTTTCAGCGA GAGTGTTTCC GGCTAAAGGG
CTGTTTGACA CGAAAGGATC CGCGGTCTTT TCGCCAAATG TGACGACAGA GAGCGACGAC
GCAGAACAAC TCGTCGCGCT TTGCCTGTTG CTAAACACGT CCCTGGGTCA ATTTCTTTTC
GACTCGTCTG GAGGGGCGTC TGACGAAGGA AAAGCGCGAG ACTACTCGCA AGGTATGGTT
GGAGCTCTTC CTGGCCTAGC GGACATCAAG CGTGCAATGA ATCCTGTCTT GCAGGAAGCT
AAGGATGTGA TCGGTGAGCT TGTACGACTT CAGGGTAGTG ATCCAACGTC GATTTATTAC
ACGGGCTTGC CATCCGCGTC GTGGATGAAT AGCTCGCGCC CTGAAGATAT TGTCGAGCAA
GCTACAAATC TGCAGAAGCG TTTGAGTGGG CTCCTTCGAG AGGCCGGCAC TCGATATTGT
GACGCTCTTG GCTTGGATGC CGGATCCCAA GCGTTCGTCG ATGAAACAGT TCGGGGGATG
CATCGCGAAG CCGTGCACGA AGCGCTGGCT ATCGACCCCG CGGATATCTC ATCTCAGATT
CGGCAATCGA TTCTTCTGAG CGTCTTTGCT CCGCGGAAGG TCGGAGGTGG AATCGTGCAG
CAGGTCAAGG ATAATCCATT GCTGGCCGTC GCCTGGAGCC CTCATTCTCT CAGCGAGTCA
CCTGTTCGAG TGCTCGTCAC TGACTCCGGC CATGAACTCG ATCTTGCTCG AAGGATGTCC
AAGTTCTGTC AAGAACATAA ACTCAGCGAC GATTGCGTTC GAACTTGGTG CGGTTTCGAT
GATTTTGAAG AGTGGACGAA ACTTGATGCC TTCGCAGAGC ACGTTTCGAT GTTCTCGAAA
AGCCAGCGGA TCGCCCCCGT CCTTTGGCAA ATCGGAACGG CCGACGGCCG CTACTCCATT
TGGCTGCTTA GCTACATGGT GAATCGCAAT ACCCTTCTAG ATGTCGAAAA TGATCTGGTC
GTACCGAAGA TCGCCAGCGT CAAGCGAGAA CTGGAAGCAT TCCGGGTGGA GACCGGCGCC
GCTCCAACTG CGGATCAACG CAAGAGGCTG GAAAGCTTGG AGAGTTTCTC TGAAAATCTC
GCCCGGTTTC GGGACGAGAT TGTGAAGGTG GCACTTCTTT TCGATCCTCA TGAAGAGGAT
GGAGCTACGA TCTGCGCGGC TCCTTTGTAT CGGCTCTTCC CGCAAAACAA GCCTTGGCAG
GCTGAACTCC GGAAGACTTG GAAGGATCTT TGCGATGGCA AGCTCGATTG GTCCAACGTG
GCCATGAGGC TGTGGCCTGA ACGGGTGATT CCAAAGTGCG CAGAGGACCT CAGCTTTGCC
ATCGCCCACG ATGTCGTTGA TGTGTTCTGG TTGAAAAACT CGGAAGGGAA GTGGCAAGTC
CGGAAGGTGC CGGTCCAGTC AATTGAGAGT TTGGTGGATG AACGGACTTC GTTGAATGTA
AAGACTGCGC TCAAGAATTT CATCGAGTCG TCGGATGCTG CCGGCTCCGT GAAGCGCGCC
CGAAAATCAA AGGCGGCATA G
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| Protein sequence | MDKDTRNAIE RATQKIRRIL QEDFAEQLDG VFDVRSDGRV AEEGGRHLSG RQLLLRDRIV
AAVEHKRRAG MQPTDAVRDY IRDAAFTTLN RFAALKMLEP RGLVQECISR GENSIGFTEF
CGLAPGLKTV DGAGYRLYIE SIFDELSTEV KVLFDRRDPA SALWPRKAAF DEILEILNGS
GLVGVWNEDE TIGWIYQFFN SGEERRQMRE ESQTPRDGRE LAIRNQFFTP NYVVRFLAEN
SLARIWWEMR RGDTRILLES EYLVCESFDL DQAAGMSADQ PRTKKDPRSL GAIDPACGSG
HFLLYLFGLF LMIYEEAWHD LDAPTFQGSG RTLREDFPEL EEFRKAMPGL ILRYNLFGID
IDFRCAQIAQ LALWMRAQRA FKEMNVSRAA RPRIRRANIV IAEPIPGDAP LIENFASTLK
PAALGTLFKG IVAELNHADE MGALLPLDRT LASLIDEANK SISQAREKGK QATLPGFDEQ
RAESVRYVDL RGFSSFQEAE ALLKESLEEF LINAVNGIGV RRRLFVDDAE QGLALVDLMN
RHYDVIVMNP PFGTPSDGAR ERIAAEYPQT KYDLGAAFVD EWRNRLTPRG RLGVIFNRTN
WFLSRLQHFR SRLLERSWLA CNADLGLGVL DAFVETAMTV IENGPQEKRQ SIWFRLTEGG
DREGNLRRFV RDVNSRSVTS NTFIHPQSAF ENIAGKAFSY WLSPALLHIK ELTPLTASGI
EAKQGLATKD NFRFLRLHWE LKQNGERWKL YSKGGAYAPL VGLYHLVIDW GAAASAAYAN
RDGQFCCLLT GQAHKYAFRP CITYSQRTSR FSARVFPAKG LFDTKGSAVF SPNVTTESDD
AEQLVALCLL LNTSLGQFLF DSSGGASDEG KARDYSQGMV GALPGLADIK RAMNPVLQEA
KDVIGELVRL QGSDPTSIYY TGLPSASWMN SSRPEDIVEQ ATNLQKRLSG LLREAGTRYC
DALGLDAGSQ AFVDETVRGM HREAVHEALA IDPADISSQI RQSILLSVFA PRKVGGGIVQ
QVKDNPLLAV AWSPHSLSES PVRVLVTDSG HELDLARRMS KFCQEHKLSD DCVRTWCGFD
DFEEWTKLDA FAEHVSMFSK SQRIAPVLWQ IGTADGRYSI WLLSYMVNRN TLLDVENDLV
VPKIASVKRE LEAFRVETGA APTADQRKRL ESLESFSENL ARFRDEIVKV ALLFDPHEED
GATICAAPLY RLFPQNKPWQ AELRKTWKDL CDGKLDWSNV AMRLWPERVI PKCAEDLSFA
IAHDVVDVFW LKNSEGKWQV RKVPVQSIES LVDERTSLNV KTALKNFIES SDAAGSVKRA
RKSKAA
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