| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1078 |
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| Symbol | |
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| ID | 6408734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1143527 |
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| End bp | 1144891 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642710985 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_001990102 |
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| Protein GI | 192289497 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGA AATTGTCTTT TCTCGGAGGT GCGGGGACGG TTACGGGCTC GAAATACCTC
CTGCAATCGG CGTCGCATCG GCTGCTGGTT GACTGTGGCC TGTTTCAGGG AGCCCGAGCC
CTTCGAGAGA TGAACTGGGA AAGATTCCCG GTGGAGCCGG CCGGCATCTC GGCCGTTATC
TTGACCCACG CTCACCTTGA TCACTCCGGC GCGCTCCCTC TACTGGTCAG GCAGGGCTTC
AACGGGACCA TCCTCTGCTC CGAGGCGACG GCCGCGCTCT GCGAGGTGCT GCTGCGCGAC
TCTGGGCATC TGCAGGAGCA GGATGCCCGA TTCGCCAACA AGCGCGGCTT CTCCAAGCAC
AAGCCCGCTC TTCCGCTCTA CACCGTGAAG GACGCCGAGG CGGCCTTGCG TTTACTAAGG
CCGGTATCGT TCCACGGCGG ACACAGCTTA CCAGGAGGCG GAAACCTAAT GCTCCGGCGC
GCCGGTCACA TCCTCGGAGC GGCCTCGATC GAGATCGAGT GGGAGCAAAT TTCGGTCGCG
TTCTCTGGTG ACTTGGGTCG GCACGACGAC CCGATCATGC TCCAACCCGA GCCGCTGACG
AAAGCGGATT ACCTTGTTGT CGAATCGACC TATGGCGACC GTTCGCACCC GAAAATCGAT
CCTCAACGCA CGATCGAGGA AGTCGTCGGA ACGACGGCGA GACGTGGAGG TACGGTCGTC
ATTCCGGCGT TTGCCGTTGG CCGTGTCCAG GCGCTACTTT ACTACTTCGC ACGCATCAAA
TCGGCCGGCG GTCTCAGCAA CGTACCGATC TACCTCGACA GCCCGATGGC AGTCGATGCG
AGCGAGATCT TTTGTAGATT CAAGGCCGAC CACAAGTTGT CGGACGATGA ATGCAAGACA
ACTTGCTCGG TCGCGACCTA TACACGCTCG GTCGAGGACT CAAAGCGTTT GAGCGATAGC
CCTATACCCA AGGTCATTAT TTCGGCGAGC GGAATGGCAA CGGGCGGTCG GGTACTCCAT
CATCTGAGGC GCTTCGCGCC GGATCAGAAG AACACGATCC TGTTTGCCGG ATATCAGGCC
GAAGGTACGC GAGGGGCAGC CATGACATCA GGCGCCAAAA CAATCCGGAT CCATGGCAAG
GATATACCAA TTGCTGCCGA GGTTCGTAAT ATCGACGCCC TGTCAGCTCA CGCGGACGCT
GACGAAATAG TCGCCTGGCT CAAGAGCGGA AGAATAGCGC CGAGACGAAC CTTCGTCACT
CATGGTGAGC AGCGAGCCGC GCATGCGCTG CGGAGCCACA TCGCGGATGA ATTAGGTTGG
ACAAGTCTCG TGCCCGAACG AGGTCAACAA ACAGCGCTGA GCTGA
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| Protein sequence | MSLKLSFLGG AGTVTGSKYL LQSASHRLLV DCGLFQGARA LREMNWERFP VEPAGISAVI
LTHAHLDHSG ALPLLVRQGF NGTILCSEAT AALCEVLLRD SGHLQEQDAR FANKRGFSKH
KPALPLYTVK DAEAALRLLR PVSFHGGHSL PGGGNLMLRR AGHILGAASI EIEWEQISVA
FSGDLGRHDD PIMLQPEPLT KADYLVVEST YGDRSHPKID PQRTIEEVVG TTARRGGTVV
IPAFAVGRVQ ALLYYFARIK SAGGLSNVPI YLDSPMAVDA SEIFCRFKAD HKLSDDECKT
TCSVATYTRS VEDSKRLSDS PIPKVIISAS GMATGGRVLH HLRRFAPDQK NTILFAGYQA
EGTRGAAMTS GAKTIRIHGK DIPIAAEVRN IDALSAHADA DEIVAWLKSG RIAPRRTFVT
HGEQRAAHAL RSHIADELGW TSLVPERGQQ TALS
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