| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1068 |
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| Symbol | |
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| ID | 6408724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1134574 |
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| End bp | 1135125 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710977 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001990094 |
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| Protein GI | 192289489 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAGA ATCAGTTGAA GCCGCTCATG CTGGCGAGCC TTCACGGTGA GGCAGCTGCC
CACCGCGAAC TGTTGTCACG GCTGAGCGGC GATCTGCGCG CCTATTACAG GGGCAGGCTC
GCCAGAATCG GCCGCAGCGC GACCGAGGCT GAGGATCTTG TCCAGGAAGC CTTGATGGCG
ATTCATATGA GGCGCGATAC TTACGATCCG GCGGAATTGC TGACGCCCTG GGTGCGCGCG
ATTGCGCGCT ACAAGCTGAT CGACCACCTG CGGCACACGC GGGGTTCGAT GTTGGTTGTT
CCGATCGACG ACATCGACCC GGCGGCGGAG GACAATGCGG CTGCCGGCAT CGAAAGCTCG
CTCGACCTGG GCAAACTGAT GTCGGGGCTT CCGGATAGGA TGCGGACGGC GGTGCAGGCG
GTTAAGCTCG ACGGCCTGAG CGTCGCCGAG GCCGCAGCCC GGCTCAATAT CAGCGAATCC
TCGGTCAAGG TCAGCGTGCA TCGCGGTTTG AAGGCGCTGG CGGCGATGAT TGGACGGGAG
AACGCGTCAT GA
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| Protein sequence | MDENQLKPLM LASLHGEAAA HRELLSRLSG DLRAYYRGRL ARIGRSATEA EDLVQEALMA
IHMRRDTYDP AELLTPWVRA IARYKLIDHL RHTRGSMLVV PIDDIDPAAE DNAAAGIESS
LDLGKLMSGL PDRMRTAVQA VKLDGLSVAE AAARLNISES SVKVSVHRGL KALAAMIGRE
NAS
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