| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1015 |
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| Symbol | |
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| ID | 6408670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1077436 |
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| End bp | 1079421 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710929 |
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| Product | transketolase |
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| Protein accession | YP_001990047 |
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| Protein GI | 192289442 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAGG TCGATCATTC CCGTATGGCA AACGCAATCC GGGCGCTGGC GATGGATGCG
GTGGAAAAGG CCAAATCCGG CCATCCCGGG CTGCCGATGG GCGCCGCCGA CGTCGCGACC
GTGCTGTGGA CACAGTTCTT GAAATTCGAT GCGGTCGACC CGCACTGGCC GGATCGCGAC
CGCTTCATCC TCTCGGCCGG CCATGGCTCG ATGCTGCTCT ATGCGCTGCT GTATCTGACC
GGCAACGAGG AGCTGACGCT CGACCAGATC AAGAATTTCC GTCAGCTCGA CTCCAAGACG
CCGGGGCATC CTGAGAACTG CATCACCTCC TCGGTCGAGA CCACCACCGG TCCGCTCGGC
CAGGGCGTCG CCTCCTCGGT CGGCACCGCT CTGGCAGAAC GACTGTTGCA GGCAGAGTTC
GGCGACATCG TCGATCACTA CACCTACGTG CTGTGCTCGG ACGGCGACCT GATGGAAGGC
GTCAGCCACG AAGCGATCGC ACTTGCCGGG CATCTCAGGC TGTCGAAGCT GATCTTCCTG
TACGACGACA ACGGCATCTC GATCGACGGG CCGCTGTCGC TGACCGACAA TGTCGACCAG
GTCGCGCGCT TCCAGGCGCA TGGCTGGAAT TCGTTCCGGA TCGACGGCCA CGACCACAAG
GCGATCGCCG ACGCGATCCG TAAAGCCCAG GCCTCCGACC GGCCGACCAT GATCGCCTGC
AAGACCACGA TCGGGTTCGG CGCGCCGCAC AAGGCCGGCA CCTCGAAGGC CCATGGCGAG
CCGCTCGGGG CCGAGGAGCT TGCGGGCGCC AAGAAGGCGC TCGGCTGGGA TTACGGCCCG
TTCGAGATTC CCGACGACGT GCTCACCGCC TGGCGCAATG TCGGCAAGCA GGGGGCATCG
GCGCGCGCCG ACTGGCTGGC GCGGTTCGAC GCCCTGCCGG CGGACAAGCG CGACGATTTC
AAGCGCCGGG TGATCGACCG CAAGCGGCCG GCGGCGATTG CGGACGCGAT CCGTACGCTC
AAGGACAAGC TGGTTGCCGA GCCGCAGACC ATCGCGACCC GCAAAGCCAG CGAGCTGGCG
CTGGAAGCGC TGACGCCGGT GGTGCCCGAG CTGCTACTCG GCTCCGCCGA CCTGACGCCC
TCCAACAACA CCCGCGTCAA GCAGGCCAAG GACGTGACGC CGGACGATTT CTCCGGCCGC
TACATCCACT ACGGCATCCG CGAGATGGGC ATGGCGGCGG CGATGAACGG CTTGGCGATG
CACGGCGGAT TTGCGCCCGC GGGCGGCACC TTTCTGTGCT TCACCGACTA CGCGCGCCCA
TCGATACGGG TGGCGGCGCT GTCGCATGTG CCAGTCGTGT ACATCATGAC CCACGACTCG
ATCGGGCTCG GCGAAGACGG CCCGACGCAT CAGCCGGTCG AACATCTCGC GGCGCTGCGG
GCGATGCCGA ACTTACGGGT ATTCCGCCCG GCCGACGCGG TGGAAACCGC AGAGTGCTGG
CAGCTCGCGC TGGAAAACAC CAATGGGCCA ACCTTGCTGG CGCTGTCGCG GCAGAACCTC
GCCCAGGTCC GCACCGCGAC GTCCGAGGCC AACCTCTGCG CCACCGGCGG CTATGAGCTG
ATCCCGGCAC CCGGCAAGGC GCAGGTTTCG ATCTTCGCCA CCGGTTCCGA GGTCGAGATC
GCAGTCGCGG CCCAGAAGCT GCTTGAGGTG CAGGGCGTCG CCGCCCGCGT CGTCTCGGTG
CCGTCGCTCG ATCTGCTGCT GGCCCAGGAC GATGCCACCC GCGCGGCGAT CATCGGCGAT
GCACCGGTCA AGGTCGCGGT CGAAGCCGCG GTGCGGTTCG GCTGGGACGC GGTGATCGGC
CCGGCCGGCG GCTTCGTCGG CATGACCGGC TTCGGCGCCA GCGCACCGGC CAAGGACCTC
TACAAGCACT TCGGAATCAC CGCCGAAGCT GTGGCGGACG CCGCTAAGCG TCGGCTCGCC
GCCTAA
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| Protein sequence | MAQVDHSRMA NAIRALAMDA VEKAKSGHPG LPMGAADVAT VLWTQFLKFD AVDPHWPDRD
RFILSAGHGS MLLYALLYLT GNEELTLDQI KNFRQLDSKT PGHPENCITS SVETTTGPLG
QGVASSVGTA LAERLLQAEF GDIVDHYTYV LCSDGDLMEG VSHEAIALAG HLRLSKLIFL
YDDNGISIDG PLSLTDNVDQ VARFQAHGWN SFRIDGHDHK AIADAIRKAQ ASDRPTMIAC
KTTIGFGAPH KAGTSKAHGE PLGAEELAGA KKALGWDYGP FEIPDDVLTA WRNVGKQGAS
ARADWLARFD ALPADKRDDF KRRVIDRKRP AAIADAIRTL KDKLVAEPQT IATRKASELA
LEALTPVVPE LLLGSADLTP SNNTRVKQAK DVTPDDFSGR YIHYGIREMG MAAAMNGLAM
HGGFAPAGGT FLCFTDYARP SIRVAALSHV PVVYIMTHDS IGLGEDGPTH QPVEHLAALR
AMPNLRVFRP ADAVETAECW QLALENTNGP TLLALSRQNL AQVRTATSEA NLCATGGYEL
IPAPGKAQVS IFATGSEVEI AVAAQKLLEV QGVAARVVSV PSLDLLLAQD DATRAAIIGD
APVKVAVEAA VRFGWDAVIG PAGGFVGMTG FGASAPAKDL YKHFGITAEA VADAAKRRLA
A
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