| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0952 |
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| Symbol | |
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| ID | 6408606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1013011 |
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| End bp | 1014009 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710866 |
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| Product | putative substrate-binding component of ABC transporter |
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| Protein accession | YP_001989985 |
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| Protein GI | 192289380 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0791916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGAG TTGTCGCCGC CCTGTTCGCC GTCCTGCTGA CCGCCGTGCC GGCGGCTGCG
CAGACGCCGC TGAAGATCAT GGTGGGCGGC ATCGACAAGC AGATCTATCT GCCGGCCAAG
CTCGCCGCCC AGCTCGGTTT CTTCAAGGAG GAAGGGCTCG ATGTTGAGCT GTTCAACTCC
ACCTCAGGCT CGCAGGCCGC CACCGCGCTG TTGGCGCGCG AAGTCCAGGG CGTCGTCGGA
TTCTACGATC ACACCATCGA CCTGCAGGCC AAGGGCAAGT TCATCACCGA CGTGGTGCAG
TTCTCGGTCG CGCCCGGCGA GGTCGTGCTG GTGAAGGCGG CCGAAGCTGA CAAGCTGAAG
CAGCCCGCGA ACTGGAAGGG CTTGGCGCTC GGCGTGACCG GCCTCGGCTC GGCCACCGAC
TTTCTCACCC GCGCGCTCGC CGCCAAGGCC GGCCTGAAGA TGCAGGACTA CACGCTGGTG
CCGGTCGGCG CCGGCGACAC CTTCCTGGCG GCGATGCAGC AGGGCAAGAT CAGCTCGGGC
ATGACCACCG AGCCGACCGT GCAGCGCGCG CTGAGTTCAG GCACCGCCAA GATCGGCATC
GACCTGCGCT CGCCGGAGCA GACCCGCAAG GCGCTCGGCG GCGACTATCC GGCCGCTTGC
CTGTACATGG ACCGCGGCTG GATGGAGGCA AACAAGCCCA CCGTGCAGAA GCTGGTGAAC
GCCTTCGTCA AGACGCTGAA ATGGATCCAG GCGCATTCGG CCGAAGAGAT CGCCGACAAG
ATGCCGAAGG ATTACTACGC CGGCGACCGC GCCCTCTACG TCCAAGGCCT GCAGGACGGC
AAGGTGCAGT ACTCGCCCGA CGGCATGATG CCGGCCGGCG CTCCGGAATC CGTCGCCAAG
ATCCTTGCCA GCTTCTCGCC CAACCTGCAG GGCAAGACGA TCGATCTGGC CAAGACCTAC
ACGACGGAGT TCGTGGTGAA GGCGAATGCG GGCCAGTGA
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| Protein sequence | MRRVVAALFA VLLTAVPAAA QTPLKIMVGG IDKQIYLPAK LAAQLGFFKE EGLDVELFNS
TSGSQAATAL LAREVQGVVG FYDHTIDLQA KGKFITDVVQ FSVAPGEVVL VKAAEADKLK
QPANWKGLAL GVTGLGSATD FLTRALAAKA GLKMQDYTLV PVGAGDTFLA AMQQGKISSG
MTTEPTVQRA LSSGTAKIGI DLRSPEQTRK ALGGDYPAAC LYMDRGWMEA NKPTVQKLVN
AFVKTLKWIQ AHSAEEIADK MPKDYYAGDR ALYVQGLQDG KVQYSPDGMM PAGAPESVAK
ILASFSPNLQ GKTIDLAKTY TTEFVVKANA GQ
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