| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0925 |
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| Symbol | |
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| ID | 6408579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 985307 |
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| End bp | 986038 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710839 |
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| Product | porin |
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| Protein accession | YP_001989958 |
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| Protein GI | 192289353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.743956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAGA TTCTGCTCGG CACCGTGGCC CTGGTCGCCC TCGGCGCGGC CCCGGCCCTC
GCCGCGGACC TCGCTGCCCG CCCGTACACC AAGGCTCCCG CCTACGCCCC GGCCCCGGTT
TACAACTGGA CCGGCTTCTA CATCGGTGGT CACATCGGTG GCGCCTTCTC GGGCGACAAC
AGCATCGGCA CCGGCGTTAC CGCCAGCGAC AACGGCAAGT TCCTCGGCGG TGTGCAGGCC
GGTTACGACT GGCAGTTCGC TCCGAACTGG GTGCTCGGTG TTGAAGGCCA GTACTCCTGG
CTGAGCGGCA CCAACCAGTC GGTCGCCTTC GGAGGCACCC TCAACGGCGC CCCCGGTGTC
TTCACCTATG CCGACAACCA GCGTGGTCTG GCGTCGGTCA CCGGCCGCCT CGGCTACACC
TGGGGTCCGG CACTGCTCTA CGTCAAGGGC GGTTGGGCTT ACGCCGACTA CTCGAGCAGC
TTGACCTTCG TCCCCAACGC CGGCGGGTTC GCTGCCGTTG CGATCGACAG CAAGAAGGAC
GGTTACACCG TCGGTGGCGG TCTCGAATAC CTGTTCGCTC CGAACTGGTC GGGCAAGATC
GAGTACCAGT ACTACGACTT CGGCAACGTC GACCTCGGCA ATGGCTTCTC GGCCAAGAAC
GACGAGCACG TTGTCAAGGC CGGCCTGAAC TACCGCTTCA ACTGGGGCGG TCCGGTCGTC
GCCAAGTACT AA
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| Protein sequence | MKKILLGTVA LVALGAAPAL AADLAARPYT KAPAYAPAPV YNWTGFYIGG HIGGAFSGDN
SIGTGVTASD NGKFLGGVQA GYDWQFAPNW VLGVEGQYSW LSGTNQSVAF GGTLNGAPGV
FTYADNQRGL ASVTGRLGYT WGPALLYVKG GWAYADYSSS LTFVPNAGGF AAVAIDSKKD
GYTVGGGLEY LFAPNWSGKI EYQYYDFGNV DLGNGFSAKN DEHVVKAGLN YRFNWGGPVV
AKY
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