Gene Rpal_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0863 
Symbol 
ID6408517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp916107 
End bp916739 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID642710777 
Productputative phage repressor 
Protein accessionYP_001989896 
Protein GI192289291 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.767338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATGC TGACGCATGA TCAGATCTGG ACTGCGCTCG ACCGGCTGGC CGAACGGGCC 
GGCCTCTCCC CGTCAGGACT CGCCAAGAAA TCCGGCCTCG ACCCCACCAC CTTCAACAAG 
TCGAAGCGGA TCACCAATGA CGGCCGCGAG CGCTGGCCTT CGACCGAATC AGTCGCCAAG 
GCGCTGCAGG CCACCAACAC CGCGATCGAT ACGTTCGTGC AACTGATTCA CGACCGGCCG 
CGGGTAGTGC AGTCGGTCCC GCTGCTCGGC CTCGCCCAGG CCGGCTCCGG CGGGTATTTC 
GACGATGGTG GCTTTCCGGT CGGCAAGGGC TGGGACGAAG TCGGGCTGCC ATCGATCACC 
GACGAGCACG CCTACGCGCT GGAAATCTCC GGCGATTCGA TGAAGCCCGC GTATCGCAGC 
GGCGACATCG TGGTGGTATC GCCGAGCGCC ACCGTGCATC GCGGCGACCG CGTGGTGGTC 
AAAACCACCA AAGGTGAAGT GATGGTGAAG GAGTTGAAGC GGCGCACCGC CAAGGTGGTC 
GAGCTGGCTT CTCTCAATCC CAGCCATCCC GACCGGACTC TGGCACCGTC AGAGATCGAA 
TGGATCGGCC GAATCGTCTG GGCCAGTCAG TAA
 
Protein sequence
MQMLTHDQIW TALDRLAERA GLSPSGLAKK SGLDPTTFNK SKRITNDGRE RWPSTESVAK 
ALQATNTAID TFVQLIHDRP RVVQSVPLLG LAQAGSGGYF DDGGFPVGKG WDEVGLPSIT 
DEHAYALEIS GDSMKPAYRS GDIVVVSPSA TVHRGDRVVV KTTKGEVMVK ELKRRTAKVV 
ELASLNPSHP DRTLAPSEIE WIGRIVWASQ