| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0836 |
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| Symbol | |
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| ID | 6408489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 882505 |
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| End bp | 884868 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710749 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001989869 |
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| Protein GI | 192289264 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGG ATGCGCATCC GGACACACGC AGCCTGATCG GCAAGACGCT TGCGGCGGGC
CAGCGCCGGC CGCTGCGAAC CATCACGCTC GCGGCCCTGC TGACCTCGAG CAGCCAGCTC
TGCTTTGCGC AATCGGCAAC GCCCGGCGCC ACCATCACGC TCGATACCAT CGTGGTCGAG
CAGCGGCGTG AAGCCGTGCG AGCGCCGGCG CGGCCGCGCT CGGTGGTGCG CCGCGCCGCT
CCCGCGACGA CGCCAAGCGC GGCGCCGACT GCTTCCGCAA CGCAGACGGT GGACCTGGTG
CGCGAGCGCT TCAACGTGCT GGCCGGCGGC GTCGCGCTGG TGTCGCAGAA GGACATGCCG
AACGCCGGCA ATCCGACGCT CGCCAATACG CTGTCCGGCG TTCCCGGGCT GATCATCCAG
AATTTCCTCG GCGCCAACGA CCAGCCGCGG ATTCAGATGC GCGGCTCGGC GCAGCAGAAT
CCGGCCGAAC GCGGCGTGCT GGTGCTGTAT AACGGCCTGC CGATCAACCG CGCCGACGGC
TCCTACGTCG TCGGCTTCGC CAATCCGCGG CAGGCCGAAG CGATCGAAGT GTATCGCGGC
TACATGGCCA ACCGGCTCGG CGCCACTGTG CTGAGCGGCG CGATCAACTT CATCTCGCCG
ACCGGATCGA GCCAGCCCGG CGTGCAGATG TCGGTGAGCG GCGGCAGCTT CGGCCAGATC
AACAGCAGCG CACAGATCGG CACCAAGAAG GACAATGTCG ACGCGTTCCT GCAGTTCGAC
ACCACCCGCC GCGACGGCTT CCGCGACTAC AATTCATCGG ACCGCACCAG CCTGAACGCC
AATGTCGGCA TCGCGCTGTC GGAGAACGTC AAGACCCGGT TCTTCCTCGG CTACACCGAT
CTCGGCTTCG ACGTCGCCGG TCCGATCAAC AAGGACGCGC TGTTCGCCAA TCCGCGGCAG
ACCGCGACCG GGCCGACCGT GGTCAACGGC GTCGCGATCA ATCCGGGGCC GAACGCGGTG
CGCGACAAGC CGCGGCGCGA CGCCAGCCAG TTCATGATCG GTAACCGCAC CACCGCAACG
TTCGATGCAC ATCTGATCGA TATCGCGCTC GGCTACACCT ACACCGACGA CACCTTCCGG
TTTCCGATCT CCTCGGGTGT GCGCGCTACC AAAGGCGGCG ACTTCACCGG CCTGGTGCGC
TACGCCTACA ACCCGGCCGA CGCGCTGCTG CCGCTGTTCG AAACCACTGC GCAATACAGC
GTCGGATCGG CGGATCGCGA CTACTATCTC AACCAGAGCG GCATGACCGG CGCGCAGTTC
GGCAGCAACC GGCTCGACGC TCAGACGCTG TCATTGTTCG CCGGCGCCAA TGTGCCGGTC
TGGCAGCAAT GGACGGTGTC GCCGGCGATC TCTTACGCCT ACGCGACCCG CGACAATGAC
GACCGTTACA CCGCCGCGAC GCGGCCGACC ATCGCGTACA ATCCGTCGAA GCCCACGGTG
CTGCTGCCGA ACGGCTCGGT GCCGACCCAG GACAACGGCT ACGCGCGATC CTACTCGGGC
TGGAATCCGA GCCTGGCGCT GTCATATCGG CCCGACGCGA CGCAAACCTT CTTCATCGCC
GGCAGCCACA GCTTCGAGCC GCCGACCCAT GACGACCTGA TCGCGACCAT CAACGGCACG
CCGAATTCCA GCCCCGGCCG CCCGACGCCC CCGAGCCCGA ATCTGAAGGC CGCGGCGTTC
GCGACGCCGA ACCTGTCGGC GCAGACCGCC GTGACGGTCG AAGGCGGCTG GCGCGGCCGG
GCCGACCGGT TCTCGTGGGA CGTCGTCACC TACTACTCGT GGATCGACAA CGAGCTGCTC
AATTTGCGCG ACGTCACCGG CGCCTCGATC GGCGCGATCA ATGCCGACCG CACCACGCAT
TTCGGCATCG AGCTCGGCGC CGGCGTGAGA TTCACCGACA AGCTCTCCGG CCGGCTCGCC
TACACCTATC AGGACTTCCG CTTCGTCAAC GATCCGCTGC GCGGCAACAA CAAGCTCGGC
GGCGCGGTGC CGCATCTGAT CTACGCGCAG CTGCAACTGC AGGCGACCGA CGCCTGGATG
GTGCAGGGCG CGGTGCGCTG GAGCCCGGCG TCGGTGCCGG TCGACAATAT GAATACGCTG
TATGCCGATC CCTACGCGGT GGTGGATCTG CGCAGCGAGT ACCGGATCAA CAAGACGTTC
CGGGTGTTCG GCGAGATCAC CAACCTGTTC AACAAGACCT ATGCGGCTAC CTCACTGGTG
GTGGATCAGG CGCGGCCCGA CCAGGCGGCC TTCCTGCCTG GCGACGGCCG CGGCTTCTAC
GCCGGCATCA AGGCGTCGTT CTAA
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| Protein sequence | MKADAHPDTR SLIGKTLAAG QRRPLRTITL AALLTSSSQL CFAQSATPGA TITLDTIVVE
QRREAVRAPA RPRSVVRRAA PATTPSAAPT ASATQTVDLV RERFNVLAGG VALVSQKDMP
NAGNPTLANT LSGVPGLIIQ NFLGANDQPR IQMRGSAQQN PAERGVLVLY NGLPINRADG
SYVVGFANPR QAEAIEVYRG YMANRLGATV LSGAINFISP TGSSQPGVQM SVSGGSFGQI
NSSAQIGTKK DNVDAFLQFD TTRRDGFRDY NSSDRTSLNA NVGIALSENV KTRFFLGYTD
LGFDVAGPIN KDALFANPRQ TATGPTVVNG VAINPGPNAV RDKPRRDASQ FMIGNRTTAT
FDAHLIDIAL GYTYTDDTFR FPISSGVRAT KGGDFTGLVR YAYNPADALL PLFETTAQYS
VGSADRDYYL NQSGMTGAQF GSNRLDAQTL SLFAGANVPV WQQWTVSPAI SYAYATRDND
DRYTAATRPT IAYNPSKPTV LLPNGSVPTQ DNGYARSYSG WNPSLALSYR PDATQTFFIA
GSHSFEPPTH DDLIATINGT PNSSPGRPTP PSPNLKAAAF ATPNLSAQTA VTVEGGWRGR
ADRFSWDVVT YYSWIDNELL NLRDVTGASI GAINADRTTH FGIELGAGVR FTDKLSGRLA
YTYQDFRFVN DPLRGNNKLG GAVPHLIYAQ LQLQATDAWM VQGAVRWSPA SVPVDNMNTL
YADPYAVVDL RSEYRINKTF RVFGEITNLF NKTYAATSLV VDQARPDQAA FLPGDGRGFY
AGIKASF
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