| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0799 |
|---|
| Symbol | |
|---|
| ID | 6408452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 837348 |
|---|
| End bp | 838754 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642710712 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001989832 |
|---|
| Protein GI | 192289227 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACG CCCTGTTGTC TCGCTTCGTT CGAGATCGCA AAGCGAACAT CGCGGTCATT
ACCGCGCTCG TGATGATTCC CATCATCTTT CTGCTCGGCA TGACGCTCGA CTTCACCCAG
GCGCTGCGCA AGAAGCAGCA ACTCGACGCC GCCGCTGACG CTGCCGCCAT CGCGGCCGTT
CGTCCGGCCA TGCTGATGCA AACCGACGCG GTGGCACAAA ACACCGCCTA TGCGATCTTC
ATGTCGACCG CCAACCGGCT GGCGTCCGGG TTGACGTCGG TGCCGACGCC GACCATTACG
ATCACTGACG TCGGGCTTCA GCGCACCGTC AAAGTGTCCT ACAACGCCGC ATCCCTGAAC
AATTTCCCCC AGCTGCTTAT GAACAATGTG TCATGGGCGA TCAGTGGCGC ATCGACGGCC
CAGGCGTCCA GCGCGCCAAA TATGAATTTC TATCTGTTGA TGGATGATTC TCCGTCGATG
GGCATCGGTG CGACTGCGAC CGACATCAGC AATCTGATTG CTTCCACTGC TCCGAAGTAC
CAGAAGGCGT CATCCTCGCA GAACTGCGGC TTCGCCTGTC ATGAAACGAA TATCGCCCAT
GACGGCGGGA CCAAGGATAA CCTCGCCATC GCGCGAGCGA ACAACATCAC GTTGCGGATC
GATCTCGTGA CCAGCGCTGT CAATCAGCTG CTCAACACCT GGTCGAACTG CCCGCAGTCC
GGAGTCTCGG GGGGAGTCAT GCAGTGCATG TCGGCCCTGA ACAATACCAC GTACCGAGCG
GCTCTCTATA CGTTCGACCT GAGCCTGAAC ACGCTGGCCT CGCTCACCAC CCCGACGACG
GCCGGAGCCC AGGTTTCCAA CATTGCGCTG ATGCCAGTCG CCTATCAGAA CTGCGTGGTC
CCGACGACCA ACTGCAAGAC GGATAACGGC ACGGATATTG CGGGGGCCCT CACCAGCCTC
AATGGCATCA TGCCGAGTCC AGGCCTTGGC AGCAATGCGT CGGGCGATAC GCCCCAGGAA
GTCGTCTTCC TCGTCACCGA CGGCGTGGAG GATAAGATCG CCTCCTCCTG CCCCAACGGC
AGCTACGCTT CCTACAGCCG CTGCCAGCAG CCGCTCGACA CCGCAATCTG TACGACGATC
AAGAAACGGG GCATCAAGAT CGCGATCCTT TACACAGAAT ATCTGCAGCT CAAGACCCCC
AATGTTCCGG TGACGGACAC TTGGTACATG AGCTGGATCG ATGCTTACGA CGAGCCGACG
TCTTCGACCG GCGCCATCGC CAAGAATCTG CAAGCCTGCG CCTCCCCGGG CTTCTTTTCG
AACGTTCAAA CCGGCGGCAA CATCACGCAG GCCTTGACGG ATCTGTTCCT CAAGGTCGCG
TCGAGTACTG CCAGCCTCAC GCAATGA
|
|---|
| Protein sequence | MSDALLSRFV RDRKANIAVI TALVMIPIIF LLGMTLDFTQ ALRKKQQLDA AADAAAIAAV
RPAMLMQTDA VAQNTAYAIF MSTANRLASG LTSVPTPTIT ITDVGLQRTV KVSYNAASLN
NFPQLLMNNV SWAISGASTA QASSAPNMNF YLLMDDSPSM GIGATATDIS NLIASTAPKY
QKASSSQNCG FACHETNIAH DGGTKDNLAI ARANNITLRI DLVTSAVNQL LNTWSNCPQS
GVSGGVMQCM SALNNTTYRA ALYTFDLSLN TLASLTTPTT AGAQVSNIAL MPVAYQNCVV
PTTNCKTDNG TDIAGALTSL NGIMPSPGLG SNASGDTPQE VVFLVTDGVE DKIASSCPNG
SYASYSRCQQ PLDTAICTTI KKRGIKIAIL YTEYLQLKTP NVPVTDTWYM SWIDAYDEPT
SSTGAIAKNL QACASPGFFS NVQTGGNITQ ALTDLFLKVA SSTASLTQ
|
|---|
| |