| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0789 |
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| Symbol | |
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| ID | 6408442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 826853 |
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| End bp | 828337 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710702 |
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| Product | cobyric acid synthase |
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| Protein accession | YP_001989822 |
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| Protein GI | 192289217 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00846074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTTA CCCCCGCGCT GATGATCCAG GGCACCTGCT CCAATGCCGG CAAGTCGACG
CTGGTGGCGG GGCTGTGCCG GGCGTTGGTG CGGCGGGGGC TGAAGGTGGC GCCGTTCAAG
CCGCAGAATA TGTCGAACAA CGCTGCGGTG ACGGTCGACG GCGGCGAGAT CGGCCGGGCG
CAGGCGGTGC AGGCGCGGGC CGCAAAGCTG CCGCCGACCG TGCACATGAA CCCGGTGCTG
CTGAAGCCGG AGACCGACAC CGGCGCGCAG GTGATCGTGC AGGGCAAGCG CTTCGGCCGG
CTTGGCGCGC AGCACTTTCT CGATAAAAAG GCGGCGCTGA TGCCGCACGT GCTGGACAGC
TTCGCGCAGC TCGCACGCGA CGCCGATATC GTGTTGGTCG AAGGCGCCGG TTCGCCGGCG
GAGATCAATC TGCGCGCTGG CGACATTGCC AATATGGGCT TTGCCCAGGC CGCGAATGTG
CCGGTGGTGA TTGCCGGCGA CATCGAGCGA GGCGGCGTGA TCGCCAGTCT CGCCGGCACC
CATCTGGTGC TCGACGATGC CGAGCGGGCG CTGGTGCAGG GCTATCTGAT CAACAAATTC
CGCGGCGACG TGCGGCTGTT CGATCGTGGA CTAACGGCGA TCACCGGACT GACCGGTTGG
CCGTCGCTCG GTGTGGTGCC GTGGCTGCCA TCGGCCGCCT TGCTGCCGGC CGAGGACGCG
GTCGATCTCG ATCGGGCGCA GGCATCGACT GCCAAGCGCA TCATTGCCGT GCCGATGCTG
GCGCGCATCG CCAATTTCGA CGATCTCGAT CCGCTCGGAA TGGAGCCCGG CGTCAACCTG
GTGTTCGTCC CGCCCGGCAC GCCGATTCCG GCCGAGGCCG ACGTGGTAAT CATTCCCGGC
AGCAAGTCGA CGTTGGGCGA TCTGGCCTTC CTGCGTGCGC AGGGCTGGGA CGTCGACATC
GCGGCGCATG TCCGCCGCGG CGGGCATCTG CTCGGGCTGT GTGGCGGCTA CCAGATGCTC
GGGCGCAGCA TCGCCGATCC GGACGGCGTC GATGGTGCGC CCGGCACAGT CGAGGGGCTC
GGCCTGCTCG ACACCGTCAC GATCATGCAG GGCGACAAGT CGACTACGCT GGTGCGTGGC
ACGCATGGCG CGACCGGGGC ACCGGTCGAG GGCTACGAGA TTCATCTCGG TCGCACCGAG
GGCCCCGATT GCGCGCGGCC GGTGGTGACG ATCGAGGGCC GGCCCGATGG CGCGATCTCG
CGCGATGGCC GGGTGCAGGG CACCTATCTG CACGGCCTAT TCACGAACGA TGAGTTCCGC
CGCGCCTGGC TGGCCGGTCT CGGCATCGCC TCGCAGCTTG CCTATGAGGC GCAGATCGAA
ACCGCGCTCG ACGCGCTGGC CGATCATCTC GAAGAGCATC TCGACGTCGA GCGGATGATT
GCAATCGCGC GCGGCCGTCA GAGCACCAAC GCCAGCGCCG CGTAG
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| Protein sequence | MTVTPALMIQ GTCSNAGKST LVAGLCRALV RRGLKVAPFK PQNMSNNAAV TVDGGEIGRA
QAVQARAAKL PPTVHMNPVL LKPETDTGAQ VIVQGKRFGR LGAQHFLDKK AALMPHVLDS
FAQLARDADI VLVEGAGSPA EINLRAGDIA NMGFAQAANV PVVIAGDIER GGVIASLAGT
HLVLDDAERA LVQGYLINKF RGDVRLFDRG LTAITGLTGW PSLGVVPWLP SAALLPAEDA
VDLDRAQAST AKRIIAVPML ARIANFDDLD PLGMEPGVNL VFVPPGTPIP AEADVVIIPG
SKSTLGDLAF LRAQGWDVDI AAHVRRGGHL LGLCGGYQML GRSIADPDGV DGAPGTVEGL
GLLDTVTIMQ GDKSTTLVRG THGATGAPVE GYEIHLGRTE GPDCARPVVT IEGRPDGAIS
RDGRVQGTYL HGLFTNDEFR RAWLAGLGIA SQLAYEAQIE TALDALADHL EEHLDVERMI
AIARGRQSTN ASAA
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