| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0708 |
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| Symbol | |
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| ID | 6408361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 743679 |
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| End bp | 745394 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642710623 |
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| Product | flagellar hook-associated 2 domain protein |
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| Protein accession | YP_001989743 |
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| Protein GI | 192289138 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.208024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCGG TCAGCAGCAC GACGTCGAGC ACCGCAACGA CCAGCAGCAC GAGTTCGTTG
ACGTCGTCAT CGGGCGCCTC GGTGACGACC TCGGGCAGCT CGACCACCAC CAGCGTCGAT
TGGGATTCGC TGATCGCCTC CGCGGTGAAC GCCAAGCTTG CCGCGGCCAC TTCGATCTCG
ACCAAGATCA CCGCCAACGA GGCGAAGATC TCGGCCTATC AGACGCTGCA GACCGATCTC
AGCAAGCTGT CATCCGGACT GTCCTCGCTG GCGACCGCGG TGGTCAATTC GCTGGCCACC
AACGTGTTCG CCACGCGTGC CGCAACGCTG TCTTCGACCG GCGACGTCAG CGCCTCGTCG
GCGCTGTCGA TGAGCGTCAG CAACGGTGCC GCGACCGGCG ACCATGCGCT GACGATCAGC
CAGATCGCCA CCTCCCACAA GGTGATGGGC ACGACGCAGT CCAGTCAAAC CGAAGATCTC
GGCTATTCGG GCGTGTTTTC GCTCGGGCTC GCGGGTGGAT ACACCGCAAA CATCATCGTC
ACCAGCTCGA TGTCGCTGCA GGATATCGTC GATGCGGTCA ATGCGCAGAC TTCGACCACG
AATGTCGAGG CCTCGATCGT CCAGGTCTCC TCCGGCGCCT ACGAAATGGT GCTGACCGGC
ACCAAGGATG CGGCCGACAT CACCTATTCG AGCAGTTCTG GAACCGACAT TCTGAATTCG
CTCGGGTTCA CCGACAGCTC CGGAGCTTTT GCCAACGTGC TGCAAACCGC TCAAGCGGCG
AAGTTCTCGC TCGACGGCAT CTCGATGACG AGAGATACCA ACGACATTAC CGACGTGCTC
GCAGGCGTCA CCTTCAACCT GCTGCAGGCA ACACCGACCG GCTCAGCCAT CAACATCAGC
ATCGGAACCG ACACCAGCCA GATCCAATCG GCGCTGACCA CCTTTGTCAC CAACTACAAC
ACCTATCGAG ACGAGGTGAT CGCGCAGCAG GCGACCAACT CCGACGGCAC CGCATCGGAC
AGCGCGGTGC TGTTCGGCGA CGGGACCATG CGCGACATCA CGACCCGGCT GGAAGCGGCG
CTGAACACGA CGGTGGGTGG ACTGTCGATG AGCGACCTCG GCCTGTCGTT CAACGATCAG
AACGAACTCG AACTCGATAC AAGCACGCTG TCGACGATCC TCTCCACCAA TCTCAGCGGC
GTCACCAAGC TGCTGTCGGC GCAGACCACC ACGTCGTCCA GCCAGCTCAG CGTCGTCAAC
ACCGGAACGT CCCCCCAGTC GTTCTCGCTG GATCTGACCG TTGATTCCAG CGGAACGCTG
AGCAGCGCTT CGGTCGGTGG CGACAGTTCG CTGTTCACGA TCAGCGGCAA CACGATCATC
GGCGCGTCCG GCAGCATCTA CGCCGGTATG GCATTCACCT ATACCGGCAC CACCTCGCAG
TCGATCACCG TCACGTCGAC ATCGGGCATT GCCACGCAAA TGTACCAGAT CGCCAAGACG
GCCTCGGCCA GCACCGGCTC GCTGCAGACA CTGATCACCA GTCTGCAGAG CCGCGACAGC
GAGCTGCAGC AGCGGGTAGA CGACATCACG ACCGCGGCCG CCACGTTCAA GGCGCAGCTG
CAGACGCAAT ATGCCAAATA CCAGGCGGCG ATCGCGAGCG CCGACAACAC GATGACCTAT
CTGAAGGCCC TGCTCAACGC CAGTTCGAGT AATTGA
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| Protein sequence | MTSVSSTTSS TATTSSTSSL TSSSGASVTT SGSSTTTSVD WDSLIASAVN AKLAAATSIS
TKITANEAKI SAYQTLQTDL SKLSSGLSSL ATAVVNSLAT NVFATRAATL SSTGDVSASS
ALSMSVSNGA ATGDHALTIS QIATSHKVMG TTQSSQTEDL GYSGVFSLGL AGGYTANIIV
TSSMSLQDIV DAVNAQTSTT NVEASIVQVS SGAYEMVLTG TKDAADITYS SSSGTDILNS
LGFTDSSGAF ANVLQTAQAA KFSLDGISMT RDTNDITDVL AGVTFNLLQA TPTGSAINIS
IGTDTSQIQS ALTTFVTNYN TYRDEVIAQQ ATNSDGTASD SAVLFGDGTM RDITTRLEAA
LNTTVGGLSM SDLGLSFNDQ NELELDTSTL STILSTNLSG VTKLLSAQTT TSSSQLSVVN
TGTSPQSFSL DLTVDSSGTL SSASVGGDSS LFTISGNTII GASGSIYAGM AFTYTGTTSQ
SITVTSTSGI ATQMYQIAKT ASASTGSLQT LITSLQSRDS ELQQRVDDIT TAAATFKAQL
QTQYAKYQAA IASADNTMTY LKALLNASSS N
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