Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0586 |
Symbol | |
ID | 6408236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 635045 |
End bp | 637786 |
Gene Length | 2742 bp |
Protein Length | 913 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710499 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001989621 |
Protein GI | 192289016 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.415477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGT CGGTGCGCCT GACCCTGGCG ATGACCGCGC TGGTGGCGTG TACGGTGGCG GCGATCGGAG TGCTCGCTTA CTACAATATC GGCCGGGCGG TGGTGCCGTC CGGACTGACA CGGCTCGCCT ATCAGGCCAA GGCGCGGCTC GGTGCCTACG AGTCGGTGCT CCGCATCATC CGCAACGAAG TGTTGTCGGC CCGGCTGTTG CCGGCGCATC TCGGCATCGC GAGGGCGCAG CGCGGCAGCG GCTTCGATCC CGAAGTCGGG CTGAGCGACG CGCAATGGCG CAAGCATCTG GCCGCGGCCT ATGCGGGGAA CATGCGGGTC AAGCCCGGCA TTCTGGCGTA TCGCCTGATA GGCGTCGCCG ACGATGGCCG CACCCTGATC GCTGTCGATC GCCATGGTCC GAACGGGAGC GTACGAACGG TGCCGGATGC CGAGCTGACG CGGCTCGGCG GCGATGAAGC GTTCCGCCGC GCTTTGGAAC TCACCGGCGA TGAGGTGTTC TTCTCGCCGA TCCGGATCTT CTCCGACGCG AACAACGCCG GCACGGTTCC ATCTTCGCCG CGATTCACCG TGGCTGCGCC GGTCCGCGAT GAGGAGGGCA CCGTGTTTGC GGTGCTGATG GTTACGCTCG ACCTGCGGCC GATTTTCGAG CGCATCCGTG ACGTGCTGGA CAACGACACC GACGTGTACT TCGTCGAGGC CGACGGCAGC TACATGATGA CCTATATCGA TGGTCGGATC CTGCCGGCCG AGCCGGAGCG GCGCTGGCAG GACGACTTTC CACAACTGGC GGCCACGCTC GGCGACAAGC CTGGAACCGC GGCGGTGTTC TCCCGCCCCG ATGGCGAGCG CGTCGCCGCC GCAATCGTGA TGGCGACGCT GTCGAGCGGC GTACGCACCG CTGTGATCGA AACCGAGCCC CTGGAACGGA TCATGGCGCC CGCCACCGCA CTGCGGACGC CGGGACTGAT CGTCGGCCTT GCCGCCATCC TCGGTGCGGT GCTGCTGTCG GCGCTGCTGT CGCGCTCGCT GGCCAAGCCG ATCGCGCAAC TCACCCGCGC GGTGATTGCG TTCTCACGGA CCGGGCGGCT GGTGGTGCCG GTTGGGCTGC ACGGCGAGAG CCGCATCCTC GCCGACGCGT TCGACGAAAC CGTCGCCAAG ATCGACGCAG CGAATGCGGC GCTGCGCGGC AAGTCCGAAC TGCTCGACAA GACCATCGCC AGCATGGCGG ATGCGGTCGC TGTGCTCGAC GCCGACGGCA AGCGGGTGTT TGCCAATCCG ACCTGCGTGA CGTTGTTCGG AGTCGCGGAA GATATCGGCT CCGAGCGCTG GAAGCTGAAA TACAAGCGCT TCCTCGCCGA TGGCGTGACG CCGATGCCGG ACTACGACAG CCCGGCGGCG CGGGCGCGGC GCGGCGAGAG TTTCGACAAC GTCGAACTCG GTATCCGACA CGGCGACGAC CCGGTGGTGC AGCTCGCCGC AAGTGCGCGG CGGATCGAGA ACCCCGACGG TTCGTTCGCC GGCGCGGTGA TCGTGTATCG CAACCTGACA GCGTTCAAGG AATCCGAGCG GCAGCTGCGC CAGGCTCAGA AGATGCAGGC GATCGGCCAG CTTACCGGCG GCGTCGCGCA CGACCTCAAC AACATTCTCA CCGTGATCAC CGGCGGCATC GAAATTCTCG CTGACGGCGT GTCCGACCGG CCGGGGTTGA AGGATGTCGC CGCGATGGTC GACCAGGCGG TGACGCGGGC CTCGGATCTC ACCCACGGCC TGCTGTCGTT CTCGCGCAAG CAGCCACTGC AGCCGCGCAG CATCGACGTC AACGCGCTGA TGCTCGACAC CGTCAAGCTG CTGCGGCCGA CGCTTGGGGC CGGCATCGAG ATCGATGTCG AGCCTGCGCC TGATCTGCGG CCGGCGCTCG CCGATCCGTC GCAGCTCGGC AGCGCGCTGA TCAATCTTGC GATCAACGCC CGCGATGCGA TGAAGGGTAA CGGCAAGCTG CTGCTGGAGA CCGGCAACGT CGACCTCGAC CAGGCCTATG CGGCGCAGCA CGACGAAGTC AGTGCTGGCC GTTACGTGAT GCTGGCGGTG AGTGATACCG GCTGCGGCAT TCCGGCGTCG ATCCGCGATC GGGTGTTCGA GCCGTTCTTC ACCACCAAGG CGGTCGGCGA GGGCACCGGG CTCGGGCTGA GCATGGTGTA CGGCTTCGTC AAGCAGTCCG GCGGCCACAT CGAGCTGTAC AGCGAGGAGG GCCACGGCAC CACCATCCGG CTGTATTTGC CTTATGCCGC TGCGAATCTC GATGTCGGGC CCGACAGCGC CGCTCCGCCG CTGGCGCAAG GCGGGCGCGA GTCGGTGCTG GTGGTGGAAG ACGACGCGCT GGTGCGTAGC TACGTGATGA CGCATCTGAA GGCGCTCGGC TACACGGCGC ATTCGGCGGC TTCCGCAGCG GAAGCGATGT CGATGGTGTA TGACGACGTC GAGTTCGATC TGTTGTTTAC CGACGTGATG CTGTCCGGCG GCATGAACGG CCCGCAGCTC GCCGACGAGC TGCGCAAGTA CAAGCCGAAT CTGAAGGTGC TGTTCACTTC CGGCTATACC GAGAATGCGA TGCTGCATCA CGGCCGGCTC GACCCCGCGG TGATGCTGCT GCCGAAGCCG TATCGCCGCG CCGATCTGGC CCGGATGCTG CGCCGGGTGC TCGACACCGA AGCCGACGTG CCGGCGAAAT AA
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Protein sequence | MRLSVRLTLA MTALVACTVA AIGVLAYYNI GRAVVPSGLT RLAYQAKARL GAYESVLRII RNEVLSARLL PAHLGIARAQ RGSGFDPEVG LSDAQWRKHL AAAYAGNMRV KPGILAYRLI GVADDGRTLI AVDRHGPNGS VRTVPDAELT RLGGDEAFRR ALELTGDEVF FSPIRIFSDA NNAGTVPSSP RFTVAAPVRD EEGTVFAVLM VTLDLRPIFE RIRDVLDNDT DVYFVEADGS YMMTYIDGRI LPAEPERRWQ DDFPQLAATL GDKPGTAAVF SRPDGERVAA AIVMATLSSG VRTAVIETEP LERIMAPATA LRTPGLIVGL AAILGAVLLS ALLSRSLAKP IAQLTRAVIA FSRTGRLVVP VGLHGESRIL ADAFDETVAK IDAANAALRG KSELLDKTIA SMADAVAVLD ADGKRVFANP TCVTLFGVAE DIGSERWKLK YKRFLADGVT PMPDYDSPAA RARRGESFDN VELGIRHGDD PVVQLAASAR RIENPDGSFA GAVIVYRNLT AFKESERQLR QAQKMQAIGQ LTGGVAHDLN NILTVITGGI EILADGVSDR PGLKDVAAMV DQAVTRASDL THGLLSFSRK QPLQPRSIDV NALMLDTVKL LRPTLGAGIE IDVEPAPDLR PALADPSQLG SALINLAINA RDAMKGNGKL LLETGNVDLD QAYAAQHDEV SAGRYVMLAV SDTGCGIPAS IRDRVFEPFF TTKAVGEGTG LGLSMVYGFV KQSGGHIELY SEEGHGTTIR LYLPYAAANL DVGPDSAAPP LAQGGRESVL VVEDDALVRS YVMTHLKALG YTAHSAASAA EAMSMVYDDV EFDLLFTDVM LSGGMNGPQL ADELRKYKPN LKVLFTSGYT ENAMLHHGRL DPAVMLLPKP YRRADLARML RRVLDTEADV PAK
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