Gene Rpal_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0556 
Symbol 
ID6408206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp605787 
End bp606299 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID642710469 
Productureidoglycolate hydrolase 
Protein accessionYP_001989591 
Protein GI192288986 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.770931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACA CCGCGCGAAA AATCGTCGCC CAGCCGCTGA GTGCAGCGGC GTTCGCGCCG 
TTCGGCCAAG TGATCGATAC GGCGCAGGTC GCCTCGCGTC CGATGAATGA CGGCAGGGCG 
AGGCGCTTCC ACGATCTCGC CGAGATCGAG GTGATCGGCG ACGGCGCGCG CGTGGTGGTC 
GGTCTGGTCG AGGCGCAACC TTACGCGGTG CCGCTCTGGC TCAACCTGGT CGAGCGCCAT 
CCGCTCGGCG CCCAGGCGTT CGTGCCGCTG AACGCCGCGC CGTTTCTAGT GGTCGTCTGC 
CCGGACGAAT CCGGCAAGCC GGGCGCGCCG CAAGCCTTCG TCACCGCCCC GCATCAGGGC 
GTCTGCTACG CCCGCAACAC CTGGCACAGC GTGCTGACGC CGTTCGGCGC CGCGCAGGAT 
TTCGTGGTGA TCGACCGCGG CGGACCGGGG GTGAATCTGG AAGAGCACCT GTTCGACGAA 
CCGTGGATCG TGCACCTGTC GACCAGCCGC TGA
 
Protein sequence
MTDTARKIVA QPLSAAAFAP FGQVIDTAQV ASRPMNDGRA RRFHDLAEIE VIGDGARVVV 
GLVEAQPYAV PLWLNLVERH PLGAQAFVPL NAAPFLVVVC PDESGKPGAP QAFVTAPHQG 
VCYARNTWHS VLTPFGAAQD FVVIDRGGPG VNLEEHLFDE PWIVHLSTSR