Gene Rpal_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0542 
Symbol 
ID6408192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp594191 
End bp594739 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content69% 
IMG OID642710455 
Productdisulphide bond formation protein DsbB 
Protein accessionYP_001989577 
Protein GI192288972 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGCCG ACCTGATCGA CCATCGAGAC ACCCTGTCCG AGACGGGCCG TCCGGAGCGG 
ATCGCCGGGG GTGTGGGGCT GACCGTCGCC GTCGTGGCCG TGGCGGCGCT GGGGTTGGCG
TGGTTCTCCC AGCTCGTGCT GGAGCTGGCG CCGTGCAAGC TCTGCCTGGA GCAGCGTTAC
GCCTACTATC TGGACATCCC GCTCGGACTG CTGATCGCCT TCGCGGCCTG GCGCCGCGCG
CCGGTCGGAC TGCTGGCGGC GGGTCTGGTC GTGCTCGGTC TGATGGCGCT CGGCAACGCC
GGCCTTGCCG CCTACCACGC CGGCGTCGAA TGGCGGTTCT GGGCTGGTCC GTCGGATTGC
TCGGGACCGA TCCTGGACCT CAGCAAGGCC GGCGGCCTGC TGGCCCAGCT CGACACGGTC
AAAGTGGTGC GCTGCGACGA GGTGCAGTGG CGGTTCCTAG GCCTATCTTT CGCCGGCTAC
AACGTGCTGG CGTCTCTGGC GCTGGCCGTG CTTTGCGGAT GGGGCTTGAT GCGGCTCAAG
CGGCGCTGA
 
Protein sequence
MSADLIDHRD TLSETGRPER IAGGVGLTVA VVAVAALGLA WFSQLVLELA PCKLCLEQRY 
AYYLDIPLGL LIAFAAWRRA PVGLLAAGLV VLGLMALGNA GLAAYHAGVE WRFWAGPSDC
SGPILDLSKA GGLLAQLDTV KVVRCDEVQW RFLGLSFAGY NVLASLALAV LCGWGLMRLK
RR