| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0521 |
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| Symbol | |
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| ID | 6408170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 569246 |
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| End bp | 570898 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710433 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_001989556 |
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| Protein GI | 192288951 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCGG TCGCCGGCAG GTTCACTCAA AATCAGCGTG GTGACGTGGA AGCCAAATTC
CAGATTTTTC TCACGCTGCT TGCGGTGCTC GCCGGAACGG CGCTGCTGGC CCGACGGGTC
AACATCGCAC CCGCGATCCT GCTGCTGATT GCCGGCATCA CCCTGGCCTT CATTCCTGGG
ATGCCGGCAA TTGAACTGCC GCCGGATCTG ATCCTGCTGT TGGTGCTGCC GCCGCTGATC
TACTCGGCGA GCGTGGCAAT GAGCTGGCGC GAATTCTGCG CCAATCTGCG GGCGATCGGC
CTGCTCGCGA TCGGCTGTGT GATCTTCACC GCATGCGCGG TGGCGGCGGC ATCGCACTAT
CTGATCGGCC TGCCGTGGTC GGTCGGCTTC CTGCTCGGTG CAATCGTCGC GCCCCCCGAC
GTGGTTGCCC CGCTGGCGAT CGCCCGCAAG CTCGGCCTAC CGCGGCGCAT CGTGGTGGTG
CTGGAAGGCG AAGGGCTGGC CAATGATGCG ACCGCGCTGA TCCTGTACCG CTTCGCGGTG
GCGGCGATCA TGACCGGCGC GTTCTCGCTG ACCAAAGCCT CCGGCACCTT CGTGGCGATC
ATGGCGGGCG AACTCGCGTT CGGCGTCGCT GTCGGCTGGC TCAGCCTGCG CGCGCGGCAT
TGGGTTCGCG ACCCGCAGAT CGAGATCACG CTGTCGCTGC TGACGCCTTA CATCGCCTAT
TGGATTCCGG AGCATCATGG CGGCTCCGGC GTGATCGCCA CCGTCGCCTG CGGTCTTTAT
ATCTCATGGA ACGGCCCGCT GCTGATCTCG GCGGCGACGC GGCTGCAGGG CATCTTCTTC
TGGGATCTGG TGATCTACCT GATCGAGGGG ATGCTGTTTC TGCTCACCGG CTTCCAACTG
CGCGCCCTAC TGGAGCGCTC GAAGGAATTT GCCTTCGGTG ACATCCTGTC TGCCACGCTG
CTGGTCGCTG CGATCGTGAT CGCCGCGCGC TTCATCTGGG TTTATCCGGC GTTCTATCTG
CCCCGGTTTC TCAGCCGCCG CTTGCGAGCG AGTGACCCCT ACCCGTCGTG GCGCACCGTT
TTCGTGATCG GCTTCACCGG CGTGCGCGGC GCGGTCTCGC TCGCCGCGGC GCTGGCGCTG
CCCTATGCGC TGCCGGGCGG CGAGACGTTC CCGTATCGCG ACCTGATTCT GTTCGTCACT
TTTGGGGTGA TCCTGATCAC GCTGGTCGGC CTCGGCCTGA CGCTGCCCGC CGTGGTGAAG
CTGCTCGGCG TCACCCGCGT CGGACACCGG GAGCAGATCG CCGAGCACGA CGACGAGATC
ACCGCCCGCC GCGAAGCACT GGCTGCCGCG CAGGCATCGC TGAAGAAGAT CACCGACAAT
CGCGAACTGA CTGACGAAGT GCTGAAGCTG CTGCACGCCC GGCACCAGAC CCGCGCCAGC
CTGCTGCCCG ATCCGATCGG CTCACCGGAG CACGAGGCCT CGGCGGTCGG CATCGCCCTG
GTGCGCGAGC TGATCGCGGT CGAGCGCAAG TTCATCCACG CCCAGCTCCG CGCCGGCAAG
ATCACCGACG AGGCGCGACG CCGGATCGAG CGCGACCTCG ACCTGGAGGA GGCCAGCCTC
GCGAACCGCG AAAGCGGCCC CGCGCCGCTT TAG
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| Protein sequence | MQAVAGRFTQ NQRGDVEAKF QIFLTLLAVL AGTALLARRV NIAPAILLLI AGITLAFIPG
MPAIELPPDL ILLLVLPPLI YSASVAMSWR EFCANLRAIG LLAIGCVIFT ACAVAAASHY
LIGLPWSVGF LLGAIVAPPD VVAPLAIARK LGLPRRIVVV LEGEGLANDA TALILYRFAV
AAIMTGAFSL TKASGTFVAI MAGELAFGVA VGWLSLRARH WVRDPQIEIT LSLLTPYIAY
WIPEHHGGSG VIATVACGLY ISWNGPLLIS AATRLQGIFF WDLVIYLIEG MLFLLTGFQL
RALLERSKEF AFGDILSATL LVAAIVIAAR FIWVYPAFYL PRFLSRRLRA SDPYPSWRTV
FVIGFTGVRG AVSLAAALAL PYALPGGETF PYRDLILFVT FGVILITLVG LGLTLPAVVK
LLGVTRVGHR EQIAEHDDEI TARREALAAA QASLKKITDN RELTDEVLKL LHARHQTRAS
LLPDPIGSPE HEASAVGIAL VRELIAVERK FIHAQLRAGK ITDEARRRIE RDLDLEEASL
ANRESGPAPL
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