Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0416 |
Symbol | |
ID | 6408063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 447645 |
End bp | 449126 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710327 |
Product | hypothetical protein |
Protein accession | YP_001989452 |
Protein GI | 192288847 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGGC TGCTTCGATG GATTCGTAAC CTGGTCGCGA TCGCCTTGCT GGCGGTCGCG GTCCTGGCCG GTGTGCTGGC CTACAACACG TTCCGGCACG GCTCGCGGCA GATCACGGTC GCCGCGGTGC CGCCGATCGC GATTGACGAG CAGGGCGCCG CTGAGCGGCT GTCGCAGTCG ATCCGCTTCC AGACCATCTC CAATTTCCTC AATCCCGAGC AGGACGCCGA GGCGCTGCGC GGCTTGCGCG CGCACATCGA GTCCAGCTTC CCGGCGTTCC ACGCCGCGGC GAAGCGCGAA ATCGTCGGCG GTCACAGCCT GCTCTACACT TGGGAAGGCA GCGACCCGCA GGCCAAGCCG ATCGGGCTAT TGGCGCATCA GGACGTGGTG CCGATCGCGC CCAAGACCGA GCAGGACTGG CAGCAGCCGC CGTTCAGCGG TGCGATCGAA GGTGGCTACG TCTGGGGCCG CGGCTCGTGG GACGACAAGG GCAACCTCTA CGCCATGCTG GAGGCCGCCG AGCTGATGGC CAAGCAGGGT TTCCGGCCCA AGCGCACGAT CTATTTCGCG TTCGGCCACG ACGAGGAAGT CTCCGGCCTG CGCGGTGCCG CCAAGATCGC CGAGCTCCTG GCCTCGCGGA AAGTCCGGCT CGATTTCGTG CTCGACGAAG GGCTCTTGAT CACCGACGGG GTGATGAAGG GCCTCGACAA GCCCGCCGCG CTGATCGGCG TCTCCGAGAA GGGCTACGCC ACGCTGGTGT TGACGGCCCG CGGCACCCCG GGCCACTCGT CGATGCCGCC GCGCGACACC ACGATCGGGA TGCTGGCCGC CGCGTTGACG CATCTCGAAG ACAACCGGCT GCCGATGCGG ATCCGCGGCT CGGTGGCCGA GATGTTCGAC ACCCTGGCGC CCGAGATGAG CGGTTTCAGC CGGGTCGCGC TGTCCAATCT GTGGCTGTTC CGGCCGCTGC TGCTGCGAGA GTTCGCCAAG AGCGGCACCA CGGCGGCGAT GGTGCAGACG ACGACGGCGC TCACCGTGTT CAACGCCGGC GACAAGGACA ACGTGCTGCC CGGCGTGGCC GAGGCCAGCG TCAATTTCCG CCTGCTGCCG GGCGACACCC AGACGAGCGT CACCGATCAC GTCCGCAGCG TGGTCGCCAA CGACCGAATC GGTATCCAGG GGTTCGACGG CAATTTCGAT CCGCCGCCGG TGACCGGGAC GAGCAGCCCG TCTTATCAGG CGCTGAATCG CACCATCCGC GAGGTGTTTC CGGACGTGGT CGTGGCGCCC GGCCTGATGA TCGCCGCGAC CGACTCAAGG CACTACGCGC AGGTCGCCGA CAACATCTTC CGGTTCTCGC CGGTGCGCGC CACGCCCGAG GACCTCAAGC GCTTCCACGG CACCAACGAG CGCATCAGCA TCAAGAACTA CGCGGATATG ATCCGGTTCT ATGTCCGACT GATGCAGTCG ACGGCGGGCT GA
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Protein sequence | MRRLLRWIRN LVAIALLAVA VLAGVLAYNT FRHGSRQITV AAVPPIAIDE QGAAERLSQS IRFQTISNFL NPEQDAEALR GLRAHIESSF PAFHAAAKRE IVGGHSLLYT WEGSDPQAKP IGLLAHQDVV PIAPKTEQDW QQPPFSGAIE GGYVWGRGSW DDKGNLYAML EAAELMAKQG FRPKRTIYFA FGHDEEVSGL RGAAKIAELL ASRKVRLDFV LDEGLLITDG VMKGLDKPAA LIGVSEKGYA TLVLTARGTP GHSSMPPRDT TIGMLAAALT HLEDNRLPMR IRGSVAEMFD TLAPEMSGFS RVALSNLWLF RPLLLREFAK SGTTAAMVQT TTALTVFNAG DKDNVLPGVA EASVNFRLLP GDTQTSVTDH VRSVVANDRI GIQGFDGNFD PPPVTGTSSP SYQALNRTIR EVFPDVVVAP GLMIAATDSR HYAQVADNIF RFSPVRATPE DLKRFHGTNE RISIKNYADM IRFYVRLMQS TAG
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