| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0411 |
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| Symbol | |
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| ID | 6408058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 440105 |
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| End bp | 442381 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710322 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001989447 |
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| Protein GI | 192288842 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCCG CCGTTCTGCC TCTCGGGCGC AATCGTCGCC TGCTGTCCTC TGTCGCCCTC
GTCCCTCTGC TCTGGCCGGT TGACGGCCTT GCGCAAACCG CCTCGGCCAA TCCGCGCGGT
CTCGACCCGA TCGTGGTCGA GGGCCAGACC GTGCGTGCCG CCAAGCCGCG CGCGACGGCC
AATGCCGGAT CGTCGCGCCA GCGCCGCGCC GCCGCGCGTC CCGTCGCGAC GCCCGGCCCC
GCGCCCACTC AGCCGACGAC GACCGCGGCG ACCGCCCCTA CCTTCAACCT CGGCACCCCG
TCCTCGACCG GCAGCCGCCT CGGCCTGACG CCGCTGCAAA CGCCGGCCAG CGTGGAAGTG
ATTCGCGCCG AGACCATCGC CGAGCGCGGC CAGCACAACG TCATCGACGC GGTGACGCAG
AACGCCACCG GCTTCACTGC GAGCCCGCGG CCGGGAAATG GCGGCCTCGC CTTCACCACG
CGCGGCTTCA CCGGCAACGG CACGGTGATG TCGCTCTACG ACGGCACCCG GCTGTATGTC
GGCTCGGGCA CCATGACGTT CCCATTCGAT ACCTGGACGG CCCAGAGCAT CGAAGTGCTG
CGCGGCCCGG CCTCGGTGAT GTACGGCGAA GGCGCGATCG GCGGCGCCAT CAACGTGATC
TCGAAGAAGC CGCTCGACGT GGCACGCAAC GAAGCCGAGA TCTCGCTCGA CACCAACATG
AGCCGTCGCC TCGCCGTCGA CTCTGGCGGG CCGATCAATC CCAATGTCAG CTACCGGCTC
GCCGCGATCG GCAACATGTC GGACGGCTGG GTCGACCGTG ACAAGAACTC GAACGTCGCG
GTGTCCGGCT CGGTACGGGT GCAGGCCGCC GACAACCTCG CCTTCACGCT GAGTGAAGAC
TACGCCGATC GCAGCCCGTC GCGCTATTTC GGCACGCCTT TGGTGAACGG CCGGCTCGAC
GAGGCGCTAC GCTTCCAGAA CTACAATGTC GGCGATGCCT CGATCCGCTA TCGCGACAAC
TGGACCCAGC TCAAGACCGA GTGGGACGTT GCCGAAGGCG TCTCAGTGAA GAACGTCACC
TATTATCTTA GCACGCACCG GCACTGGAAG GACGTCGAGA GTTACACCTA CAATCCGCTC
CGCGGCAACA TCGGCCGCAG CTCCTACATC GAGATCTTTC ACGACCAGGA GCAGATCGGC
AACCGCTTCG ACACCACCTT CAAGGGCCAT GTCTTCGGCC TCGCCAACGA ATTCGTAGCC
GGCTTCGACG TCAACCGCAT CGCTTTCACC CATACCAACA ACTCGCCCTA CGCTGGCACA
TCCTCGGTGC CCGCGTACAA TTTCGATCCT GGCTATTTCC TGCCGGTGAG CCCGACGCGA
CCGAGCTTCC ATACGCTGAC GACGCAATAT GGCGTGTTCG CCGAGAACCG GCTCAGCCTG
ACCGACCAGC TCTCGCTGAT CGGCGGCATC CGCTCCGATA ATCCGACGGT GCAGCGCACC
GACTTCCTCT CGCCTTCGAA CAGTTTCGAG AAGACCTACT CGGCGCCGAG CTGGCGGGTC
GGGGCGGTGT ACAATCCGAT CGAGAACCTC TCGATCTACG GTCAGTATTC GACCGCGGTC
GATCCGGTCA CCAACCTGAT CACCATGACG GGCGTAAATC GGGACTTCTC GCTGTCGACC
GGCAAGCAGG TGGAGGTCGG CATCAAGCAG CAGCTCGCCG GCGGCCGCGC CGAATGGACG
CTCGCGGCGT ATCACATCGT CAAGAACAAC CTGCTGGCGC GCGATCCTCA GAACCCCGCC
AACACCAATC CGCTGCAGAT CGGCCAGCAA TCGTCGCGCG GCATCGAAGC CTCGGCCGGC
CTCAAGGTCA CCGAAACCAT CCGGCTCGAT GCCAACGTCG CCTGGCTGCG GGCCAAATAC
GACGACTTCA CCCAGGTAGT CGGCGGCCGG GCGGTGAACT ACGCCGGCAA CGTCCCCAAC
AACGTGCCGC AGATCGTCAG CAACATCTGG GCGACCTGGG CGTTCGCGCC GGGCTGGTCG
GCCAATGCCG GCGTACAGCT CGTCGGCGAC ACCTGGGCCG ACGACGCCAA CACGCTGGTG
CGACCGGCCT ATAACGTCGT CAATGCCGGG CTGATGTGGA AGCCGGACAC CCGGCAGACG
CTGGCACTCC GAGTCTACAA TTTGTTCGAC ACCGTCTACA CGACATCGGG CAACACGACC
ATGTGGCAGC TCGGCATGCC GCGCACGGCG GAACTGTCCT ACAACGTGAA GTTCTAA
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| Protein sequence | MTPAVLPLGR NRRLLSSVAL VPLLWPVDGL AQTASANPRG LDPIVVEGQT VRAAKPRATA
NAGSSRQRRA AARPVATPGP APTQPTTTAA TAPTFNLGTP SSTGSRLGLT PLQTPASVEV
IRAETIAERG QHNVIDAVTQ NATGFTASPR PGNGGLAFTT RGFTGNGTVM SLYDGTRLYV
GSGTMTFPFD TWTAQSIEVL RGPASVMYGE GAIGGAINVI SKKPLDVARN EAEISLDTNM
SRRLAVDSGG PINPNVSYRL AAIGNMSDGW VDRDKNSNVA VSGSVRVQAA DNLAFTLSED
YADRSPSRYF GTPLVNGRLD EALRFQNYNV GDASIRYRDN WTQLKTEWDV AEGVSVKNVT
YYLSTHRHWK DVESYTYNPL RGNIGRSSYI EIFHDQEQIG NRFDTTFKGH VFGLANEFVA
GFDVNRIAFT HTNNSPYAGT SSVPAYNFDP GYFLPVSPTR PSFHTLTTQY GVFAENRLSL
TDQLSLIGGI RSDNPTVQRT DFLSPSNSFE KTYSAPSWRV GAVYNPIENL SIYGQYSTAV
DPVTNLITMT GVNRDFSLST GKQVEVGIKQ QLAGGRAEWT LAAYHIVKNN LLARDPQNPA
NTNPLQIGQQ SSRGIEASAG LKVTETIRLD ANVAWLRAKY DDFTQVVGGR AVNYAGNVPN
NVPQIVSNIW ATWAFAPGWS ANAGVQLVGD TWADDANTLV RPAYNVVNAG LMWKPDTRQT
LALRVYNLFD TVYTTSGNTT MWQLGMPRTA ELSYNVKF
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