Gene Rpal_0376 details

Gene Information

• Locus tag: Rpal_0376
• ID: 6408023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 401242
• End bp: 401727
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642710287
• Product: transcriptional regulator, AsnC family
• Protein accession: YP_001989412
• Protein GI: 192288807
• COG category: [K] Transcription
• COG ID: [COG1522] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.24101
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCAATC CTGCTAAAAT CACCCTGGAT GCGATCGACC TGAAAATCCT TGCCGAGCTG 
CAGGCCGACG CCCGGATTCC GAATATCGTG CTGGCCCAGA AGGTCGGGTT GTCGCCGTCG 
CCATGCTCGC GGCGGGTCAA GCTCTTGGAG CAGGCCGGCG TGCTGGCGAG CTATCGGGCG 
CTGGTCGACC GCGCCGCGGT CGGGCTAGCG GTCACGGCGT TTGCTTTCAT TCGGGTCGAG 
CGGCATTCCC GCGACAATGC CGAGAGCTTC ATCGAAGCCG TGCAGACCAT GCCGGAAGTG 
ATCGCCTGCC ATCTGGTGTC CGGAGACAGC GACTTCCTGC TCGAAGTGGT AGTGCCGGAC 
ATCGCCAGCT ATGAGACCAC CGTGCTGCGG GGCCTGCTGG CGCTGCCAAC AGTGCGCGAC 
ATCCGCACCT CGTTCGCGAT GCGCAGCTAC AAGCTCAGCG GGCCGTTGCC GCTGCCGGCG 
GCGTGA 

 

Protein sequence

MVNPAKITLD AIDLKILAEL QADARIPNIV LAQKVGLSPS PCSRRVKLLE QAGVLASYRA 
LVDRAAVGLA VTAFAFIRVE RHSRDNAESF IEAVQTMPEV IACHLVSGDS DFLLEVVVPD 
IASYETTVLR GLLALPTVRD IRTSFAMRSY KLSGPLPLPA A