Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0368 |
Symbol | |
ID | 6408014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 391867 |
End bp | 392670 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642710278 |
Product | protein of unknown function DUF81 |
Protein accession | YP_001989404 |
Protein GI | 192288799 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.461957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGCCGA ATATTCCTTT CACCGACCTC GCCACCGTCG CGTCGGGGGC CCTGGTCGGG TTCATTCTGG CGCTGATCGG CGGCGGCGGC TCGGTGCTGG CGGTGCCGCT CCTGGTCTAT GTGGTCGGGG TGCGCTCGCC GCACATGGCG ATCGGCACCT CGTCGATTGC GGTGGCGATC AGCGCGCTGG CCAACATGCT GTCGCACTGG GCCGCCGGCA ATGTGCGCTG GGCCTGCGCG ATCGTTTTCT CGGCGGCGGG CATCGGCGGC GCATTCGCCG GCGCCACCAT TGCCAAACAG ATCGACGGCC AGAAGTTGCT GATCCTGTTC GGGCTGCTGA TGATCGTGAT CGGCGCGCTG ATGTCGCGCA AGAACCGCGG CGGCGGCGAT CCGGCCGTGA GGCTGACGCG GGACACCGCC AGGGCGATGC TGCCGCGGCT GATCGGCACC GGTTTCGGCG TCGGACTGCT GGCCGGCTTC TTCGGCATCG GCGGCGGCTT CCTGATCGTG CCGGGCCTGA TCCTCGCCAC CGGGATGCCG CTGACCTCGG CGATCGGCAC CTCGCTGGTT GCCGTGGTGG CGTTCGGCGC CTCGACCGCA ACCAGCTACG CACTATCCGG ATTGATCGAC TGGCGGCTCG CCGGCAACTT CATCGGCGGC GGCCTGATCG GCGGCCTGAT CGGGATCGGC ACCGGCAAAC TGATCGGCGG CCACGACAAG GTGCTGCGCA GCGTGTTCTC CGTGGTGGTC ATCGCGGTCG GGCTGTACGT CTGCTATCGC GGTGCGATGT ACTTCCTGAC GTGA
|
Protein sequence | MLPNIPFTDL ATVASGALVG FILALIGGGG SVLAVPLLVY VVGVRSPHMA IGTSSIAVAI SALANMLSHW AAGNVRWACA IVFSAAGIGG AFAGATIAKQ IDGQKLLILF GLLMIVIGAL MSRKNRGGGD PAVRLTRDTA RAMLPRLIGT GFGVGLLAGF FGIGGGFLIV PGLILATGMP LTSAIGTSLV AVVAFGASTA TSYALSGLID WRLAGNFIGG GLIGGLIGIG TGKLIGGHDK VLRSVFSVVV IAVGLYVCYR GAMYFLT
|
| |