Gene Rpal_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0338 
Symbol 
ID6407984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp357868 
End bp358473 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID642710248 
Productribosomal RNA adenine methylase transferase 
Protein accessionYP_001989374 
Protein GI192288769 
COG category[I] Lipid transport and metabolism 
COG ID[COG3963] Phospholipid N-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0870477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTGC AGTCGTCCGT TCGCGCGTTC AAGAAGCCAC CCCGTCCGCT GGTCGACGAG 
GTTCGCTTTC TGCGCTCTTG GATCGAAAAG CCGCTGCACA TGGGCGCGGT AATGCCGTCG 
GGCAAGCTGC TTGCCCGCAC CATGGCGCGC TACGTCGACA TCCAATCAGA TGGTCCCGTC 
ATCGAACTCG GACCGGGTAC CGGCGCGATT ACCAACGCGC TGGTCGAACA CGGCGTCGAT 
CAGAAGCGTC TGGTTCTACT CGAGTTTGAT CCCGGGTTCT GCGCGCTGCT ACGCGAGCGT 
TTTCCGCTCG CCAAGGTGGT GCAGGGCGAT GCTTATCGGC TCCGTGACTC GCTGTGGGAT 
GCGCTTGAGA TCCCTGCGAC CGCGGTGGTA TCCGGCCTGC CGCTGGTCAC CAAACCGATG 
CTGACGCGGA TGAAACTGAT CCGCGATGCG TTCACGCTGC TCGAACCCGG CGCGCCGTTC 
GTGCAATTCA CCTATTCGGT CGCGCCGCCG ATCCCGAAAT CGCTGCCCGG TGTGTCCACC 
GAAGGTTCCG AACGGATCTG GATGAACGTC CCGCCTGCAC GGGTCTGGGT TTACCGCAAG 
CGCTGA
 
Protein sequence
MALQSSVRAF KKPPRPLVDE VRFLRSWIEK PLHMGAVMPS GKLLARTMAR YVDIQSDGPV 
IELGPGTGAI TNALVEHGVD QKRLVLLEFD PGFCALLRER FPLAKVVQGD AYRLRDSLWD 
ALEIPATAVV SGLPLVTKPM LTRMKLIRDA FTLLEPGAPF VQFTYSVAPP IPKSLPGVST 
EGSERIWMNV PPARVWVYRK R