Gene Rpal_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0328 
Symbol 
ID6407974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp347873 
End bp348235 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content64% 
IMG OID642710238 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_001989364 
Protein GI192288759 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.122093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGAA CGCACCAAAA GGTCGGTGAC TTACCTCGAA GTAACCCAGC CCACACACCG 
CTGACCGCCG CGCAGGGAAT CGCGGCCGGC TTCCGGCTGC TCGAGGGGCG CTGGAAAATC
CTGATCCTGT TTCATCTGTT CGGCGGCCGC GTCCTGCGGT TCTCCGAACT GGAGCGCTCG
ATCCCCGACG TGTCGCAGAA GATGCTGGCT CAGCAACTCC GGCAACTGGA GGCCGACGGC
ATCGTGGCGC GAACGGTGCA TCCGGAAGTG CCGCCGAGAG TGGAATATCA CCTCACCGAT
TGGGGGCAGT CGCTTTGCCC CGCGCTCGAC GCCCTGCTGG GCTGGGTGGA GCAGAAGCCC
TGA
 
Protein sequence
MTRTHQKVGD LPRSNPAHTP LTAAQGIAAG FRLLEGRWKI LILFHLFGGR VLRFSELERS 
IPDVSQKMLA QQLRQLEADG IVARTVHPEV PPRVEYHLTD WGQSLCPALD ALLGWVEQKP