Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0328 |
Symbol | |
ID | 6407974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 347873 |
End bp | 348235 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710238 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_001989364 |
Protein GI | 192288759 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.122093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGAA CGCACCAAAA GGTCGGTGAC TTACCTCGAA GTAACCCAGC CCACACACCG CTGACCGCCG CGCAGGGAAT CGCGGCCGGC TTCCGGCTGC TCGAGGGGCG CTGGAAAATC CTGATCCTGT TTCATCTGTT CGGCGGCCGC GTCCTGCGGT TCTCCGAACT GGAGCGCTCG ATCCCCGACG TGTCGCAGAA GATGCTGGCT CAGCAACTCC GGCAACTGGA GGCCGACGGC ATCGTGGCGC GAACGGTGCA TCCGGAAGTG CCGCCGAGAG TGGAATATCA CCTCACCGAT TGGGGGCAGT CGCTTTGCCC CGCGCTCGAC GCCCTGCTGG GCTGGGTGGA GCAGAAGCCC TGA
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Protein sequence | MTRTHQKVGD LPRSNPAHTP LTAAQGIAAG FRLLEGRWKI LILFHLFGGR VLRFSELERS IPDVSQKMLA QQLRQLEADG IVARTVHPEV PPRVEYHLTD WGQSLCPALD ALLGWVEQKP
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