Gene Rpal_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0274 
Symbol 
ID6407920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp293576 
End bp294157 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID642710184 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001989310 
Protein GI192288705 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGGA AACCAAAGCA CAAGGAGGCG ATCGTCGATG CAGCAGTGCG GCTGTTTCGG 
CGCGGCGGCT ACGCGGCGAC CGGGCTGAAC GACATCGTCG AGGCCAGCGG CGCACCCAAG 
GGCTCGCTCT ACTACTACTT CCCGCACGGC AAACCTTCGA TTGCCGAGGC CGCGGTGATC 
GAGGCGGGAC GACGGGTGGC GGCGACGCTT CAGGAGTTAG CGACGACAGC GACTTCGACC 
GCCGATCTGC TGCAGGCCCA CGCCCGGCAG CTTGCCGGCT GGATGAGCAA ATCCGGCTAC 
CGTGACGGCT GCCCGATCAC CACCGTGCTG CTCGAACTCG CCCCCGAAGA CCGCGCCGTC 
ACCAAGGCGG GGCGCGACGC CTATGCGGAG CGGATTGCAA TCTTCCGCCA GCGGCTGCTC 
GACGACGGTA TCGTCCCTGC CAGAGCGGCC GCATTGGCGG CGATGTGCAC GTCGACGTTG 
CAAGGAGCCC TGATCCAGGC GCGGGTCGAG CGAAGCGGAC GACCTTTGAT CGACGCGGCC 
CTTGAGCTTG GTGAGCTGCT GCCCCGCCCG GACGTCGCCT GA
 
Protein sequence
MPRKPKHKEA IVDAAVRLFR RGGYAATGLN DIVEASGAPK GSLYYYFPHG KPSIAEAAVI 
EAGRRVAATL QELATTATST ADLLQAHARQ LAGWMSKSGY RDGCPITTVL LELAPEDRAV 
TKAGRDAYAE RIAIFRQRLL DDGIVPARAA ALAAMCTSTL QGALIQARVE RSGRPLIDAA 
LELGELLPRP DVA