Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0266 |
Symbol | |
ID | 6407911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 285062 |
End bp | 286228 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710175 |
Product | hypothetical protein |
Protein accession | YP_001989302 |
Protein GI | 192288697 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.101624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCGA TTACCACATC ACCGCGACGA TGGCTCCGCC GGCTGGCGGC CGCTGCCTTT GTGGCGATGC CGGCGTGGAC GCTTTGGAAT CTCGCGGTGC CGTCGCACGC CGTTCGGATC GGGCCGGCAC TTGTCGGCGT CACCCAGCAG GTGCCGTTCG ATCTTTCGCT GCACGGCTTC ATCGACGGCG CACTGCAGAA AGCGGCCGTG CTGCGAATTG CGGACGCAAT GCCGCTGCGG CGAACGCTGA TTCGGCTCAA CAATCAGATC GCGTATTCGT TGTTCGGCGA GATCACCGCC CCCGGCATCC TGATCGGGCG CGACGGTGAA CTCGTGCAGC GCGGCTATCT CGAGGAATAT TGCTCGCGCA CGATCGGTCA GGCCGACACC ATGGCGGATG CCGCGATTCC GCTGCTGCGG GACATTCAGG CCTACTATCG CGATCGCGGC AAACTGTTTC TCTACATCGT GACGCCGTCC AAAGTTGCCG ATATGCCGGA CAAGTTCACG CATCTGATCG TCTGTCCGAG CAGTCCGCAG GCGCGAGCGG AACTCGTCCC AGCCTACGTT GCGCGGCTAC GGGCCGCAGG CATCGATGTG CTCGATCTGG TGACCTCGAC CCATGCGATG CGGAGCGACG ACACGCCGCC GTTCCCGCGC GGTGGCATTC ACTGGAACGA GTTGGCGATG GCGCGCGGCA GCCAGCAGAT CGTGGATGCG ATCAACACCC GGGCGGGACA CGAGTTGCTC ACGCCGTTTA GCTTTACTGT GACGGTGAGC TCGCCGGCCG AGGGGCGCGA CCGCGATCTC GCCGAGCTTG CCAATCTTCT GGTGGCGCCG ATCGACTATC CGACGCCGAA ACTGACCTAC AGTCATCCAA GCTGCGACGG CCGCGAGGCG ACGCGGATCG ATGCGGCGCT GGTCGGCACC AGCTTCATCG ACCCGGTCAG CGAAGTCCTG ACCGAGCAGG CGTGTCTGAC TCGACTCGGT CAATACTTCT ATCTCAAGCT CGGCCGCTCC CGCGGTGGGG TGCGACAGGA CAATCTGTCC GAGGCCGAGC TGCGCGAAGT TCGAGACGTC GACGTGATGC TGCTCGAAGA GAACGAAAGC CTGATCGGGC GGCAACAGTA CCTCTCGCTG CTGCACCAGA TCGTCACGAC GCCCTGA
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Protein sequence | MAAITTSPRR WLRRLAAAAF VAMPAWTLWN LAVPSHAVRI GPALVGVTQQ VPFDLSLHGF IDGALQKAAV LRIADAMPLR RTLIRLNNQI AYSLFGEITA PGILIGRDGE LVQRGYLEEY CSRTIGQADT MADAAIPLLR DIQAYYRDRG KLFLYIVTPS KVADMPDKFT HLIVCPSSPQ ARAELVPAYV ARLRAAGIDV LDLVTSTHAM RSDDTPPFPR GGIHWNELAM ARGSQQIVDA INTRAGHELL TPFSFTVTVS SPAEGRDRDL AELANLLVAP IDYPTPKLTY SHPSCDGREA TRIDAALVGT SFIDPVSEVL TEQACLTRLG QYFYLKLGRS RGGVRQDNLS EAELREVRDV DVMLLEENES LIGRQQYLSL LHQIVTTP
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