| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0246 |
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| Symbol | |
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| ID | 6407890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 261654 |
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| End bp | 263204 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710154 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001989282 |
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| Protein GI | 192288677 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATA ATCTCTCGGA TAAGCTGGGC GGTATTCTCG ATCGGCTGAC CGGGCGCGGT
GCGCTCAGCG AGGCCGATGT CGATGCGGCG ATGCGCGAAA TCCGCCGCGC GCTGCTGGAA
GCCGACGTCG CCCTCGAAGT GGTGCGCTCG TTCACCGAGC GGGTCCGCGA GCAGGCCGTC
GGCGCCACCG TCGTCAAGTC GGTCAAGCCC GGCCAGATGG TGGTCAAGAT CGTCAATGAC
GAGCTGATCG CCACGCTGGG GTCGGAAGTC CAGTCGATCG ACCTCAACGC CGTGCCGCCG
GTGCCGATCA TGATGGTCGG TCTGCAGGGC TCGGGTAAGA CCACCACCAC CGCCAAGCTG
GCGCGCCGCA TGACCGAGCG CGACAAGCGC AAGGTGCTGA TGGCCTCGCT CGACGTCTAT
CGTCCGGCCG CCATGGAGCA GCTCGCGGTG CTCGGCCGCG ATCTGCAGAT CGACACGCTG
CCGATCGTCG CCGGTCAGCA ACCGCCGGAT ATCGCCCGGC GCGCGATGGA AGCCGGCAAG
CTCGGCGGTT ACGACGTCGT GCTGCTCGAC ACCGCCGGCC GCACCACGCT CGACGAAGAC
ATGATGGCCG AGGCGGCCGA AATCAAAGCC GCCGCGAACC CGCACGAAGT GCTGCTGGTC
GCCGACAGCC TGACCGGTCA GGACGCCGTC AATCTCGCCC GCGCGTTCGA TCAGCGCGTC
GGCCTCACCG GCATCGTGCT GACCCGAATT GACGGCGATG GTCGCGGCGG TGCCGCGCTG
TCGATGCGCG CCGTCACCGG CAAGCCGATC AAGCTGATGG GCACCGGCGA AAAGACCGAT
GCGCTCGAAG ACTTCCATCC GAGCCGGATC GCCAGCCGCA TTCTCGGCAT GGGCGACATC
GTCTCGCTGG TCGAAAAAGC CGCCGCGACG CTGGACGCCG AAAAGGCCGC CGCCGTCGCC
GAGAAGATGC GCAAGGGCAA GTTCGATCTG ACGGACTTGC GCGATCAGTT GCTGCAGATG
ACCAAGATGG GCGGCATCGG CGGCCTGATG GGCCTGATGC CCGGCATCTC CAAGATGAAG
AACCAGATCG CCGCCTCCGG CATCGACGAC AAGGTGCTCA AGCGCCAGGT CGCGATCATC
GATTCGATGA CCCGCGAGGA GCGCAAGAAC CCCGACATCC TCAAGGCCAG CCGCAAGAAG
CGCATCGCCG CCGGCGCCGG CATCAAGGTC GAGGACGTCA ACAAGCTGCT GAAGATGCAT
CGCAACATGG CCGACATGAT GAAGGCCGTG GGTCGCGGTA AGGGCGGCCC GATGGCCGGC
TTCGCCAAGG CGATGGGCTT CGGCGGTGGT CTGCCCTCGC CCGACGAGAT CAAGGCGATG
CAGGAAAAGA TGAAGAGCGG CGACATGCCC GAAGGCCTGC CGGAGCTGCC GAAGGACCTG
CCTGCCTCGT TGCGTGGCGG CATGCCCAAT CTGCCCGGCC TCACCGGCCT GGCCGGCAAG
CCGACGCTGC CCGGCCTCGG CGGCTTCCCG GGATTCGGGA AGAAGAAATG A
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| Protein sequence | MFDNLSDKLG GILDRLTGRG ALSEADVDAA MREIRRALLE ADVALEVVRS FTERVREQAV
GATVVKSVKP GQMVVKIVND ELIATLGSEV QSIDLNAVPP VPIMMVGLQG SGKTTTTAKL
ARRMTERDKR KVLMASLDVY RPAAMEQLAV LGRDLQIDTL PIVAGQQPPD IARRAMEAGK
LGGYDVVLLD TAGRTTLDED MMAEAAEIKA AANPHEVLLV ADSLTGQDAV NLARAFDQRV
GLTGIVLTRI DGDGRGGAAL SMRAVTGKPI KLMGTGEKTD ALEDFHPSRI ASRILGMGDI
VSLVEKAAAT LDAEKAAAVA EKMRKGKFDL TDLRDQLLQM TKMGGIGGLM GLMPGISKMK
NQIAASGIDD KVLKRQVAII DSMTREERKN PDILKASRKK RIAAGAGIKV EDVNKLLKMH
RNMADMMKAV GRGKGGPMAG FAKAMGFGGG LPSPDEIKAM QEKMKSGDMP EGLPELPKDL
PASLRGGMPN LPGLTGLAGK PTLPGLGGFP GFGKKK
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