| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0192 |
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| Symbol | |
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| ID | 6407836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 209742 |
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| End bp | 212312 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710102 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_001989230 |
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| Protein GI | 192288625 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000202094 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCC TGACCGAGAC GCCACCCCGC ATCCCTTCCT GGTCGCTGCC GCTCCGCTAC
GCGCTGCGCG AGATGCGCGG CGGGCTGAAC GGGTTCTACG TCTTCATCGC CTGCATCGCG
CTCGGCGTGA TGGCGATCGC CGGCGTCGGC TCGGTCGCCG CCAGCCTCGG CGACGGGCTC
GCCCGTGAGG GCCGCACCCT GCTCGGCGGT GACGCGGCGT TCTCCCTAAT CCAGCGCGAA
GCGATGCCTA ACGAAGTGGC GTTCTTGCGC AGCCGCGGCG ATGTCTCGGT CGCCGCCACC
ATGCGCGGGA TGGCGCGCAC CGACGATGGC CGCTCGGCTC TGGTCGAGCT GAAAGCGGTC
GACGGCGCCT ATCCGCTGCT CGGCGACCTC AAACTCGAAC CGCCGATGCC GGTGGCCGAC
CTGCTCGCCC GGCGTGACGA TGCCTTTGGG GCCGCTGCGG ACCCAGCCTT GCTGGCGCGG
CTCGATCTGA AGATCGGCGA CAAGGTCACG ATCGGCAGCG CTACCTTCCA GATCCGGAGC
GCGGTGGCGG CCGAGCCGGA CAAGCTCTCC GGCAACATCG GCTTCGGCCC GCGCTTCTTG
ATCAGCGACG ACGGCTTGCG CGCGACCCAG CTGCTGCAGC CCGGCAGCCT GGTGCGATGG
ACTTACCGGG TCCGGCTGCC GGACAACGGC ACCGACGATC GCGCCGCGCA GCGGCTGGTC
GACGACACCC GCGCGGCGCT ACCGCAGGCC GGCTGGGAAA TCCGCACCCG CGGCAACGCC
TCGCCGCAGC TCGAACGCAC CATCACCCGC TTCACTCAAT TCCTGACTCT CGTCGGCCTC
GCCGCGCTGG TGGTCGGCGG CGTCGGTGTC GCCAATGCGG TGAAGAGCCA TATCGATCGC
CGCCGCGACG TGATCGCGAC GCTGAAGGCG GTCGGCGCCA CCGGCCGCGA CGTATTCGCG
ATCTATCTCA CCCAAGTGAT CGTGCTTGCG CTGATCGGTG CGGTGATCGG CCTGGCGCTC
GGCGCCGCGA TGCCGTTCGC GCTGGTCGGA CTGTTCGGGC AGTTACTCCC GCTGCCGGTG
GTGGCGGCGC TGCATCCCGG TGAGCTGGCG CTGTCGCTGG TGTACGGGCT GCTCACCGCT
CTGGCGTTCG GACTGTGGCC GCTGGCGCAG GTGCGCGACG TGCCGGTGGC GACGCTGTTT
CGCGAGGCCG CGACCGCCGA CAGCCATCGC CCCCGGCTAA GGCACGTCGC CTTGATCGCA
GCGGTCGTTG CAGTGCTGCT CGCGGTGGTG GTCGGGCTCG CCTACGACAA GCGCGTCGCA
CTGGCGGTGA TCGGCGCCAC CCTGGCGATC TTCGTGTTGC TGCGCGGCGT CGCCGCTGGG
CTGATGGCGA TCGCGCGCCG GCTGCCACGC TCGCGCATTA CCATGCTGCG GCTCGCCATC
GCCAACATTC ACCGCCCAGG CGCGTTGACC CCGTCGGTAG TGCTGTCCTT GGGCCTTGGC
CTCGCGGTAC TGGTTACCGT CGCGCAAATC GACGGTAACC TGAGGCGACA GTTCAGCGCC
GCGCTACCCG AGAAGGCGCC GACCTTCTTC TTCATCGACA TCCCGTCCAG CAAGACTGAT
CAATTCGGTA CATTCCTGCG CCAGATCGCG CCGAACGCGA CGCTGGAAGA CGTGCCGATG
CTGCGTGGGC GGATCGTGGC CGCCCGCGGC GTTCGCGTCG AAGACCTCAA GCCGGCGCCC
GACGCCGAAT GGGTGCTGCA GAGTGATCGC GGCCTGACCT ACGCGGCCGA TATCCCGGCC
GGTTCCAAGG TGGTCGAGGG ACGGTGGTGG CCGAAGGACT ACAGCGGCCC GCCGCTGGTA
TCGTTCGACA AGAAGCTGGC GCAGGGCCTC GGCCTTTCGA TCGGCGACAA GGTCACCGTC
AATGTGCTCG GCCGTGAGAT CACCGCCACG ATCTCGAATC TGCGCAGCAT CGATTGGCAG
AGCCTCGGGA TCAATTTCGT CCTGGTGTTT TCACCGGACA CCTTCCGCGG CGCGCCCCAC
ACCCACATCG CCACGCTCAC CGAGAGCGGC AGCACGCCGC AGAGCGATGC CGCGGTGATC
AAGCAGGTCG CCGACCGGTT TCCGATGGTG ACCTCGGTCC GGGTGCGCGA GGCGCTTGAG
ACGGTCGGCG GCGTGGTGTC GAACCTGGTG CTGGCGGTGC GCGGCGCCAG CGCGGTGACG
CTGATCTCCG CCATCCTGGT GCTGGGCGGC GCGCTCGCAG CCGGCCATCG CCACCGGGTC
TATGACGCAG TGATCCTGAA GACGCTGGGC GCCACTCGGG GGCGGCTGAT CGGCGCCTTC
GCGCTCGAAT ATGCGCTGAT TGGTCTCGCA ACGGCGGCGT TCGCGGTGCT GGCCGGCTCG
GCCGCCGCGT GGCTGATTGT CACACGACTT ATGACGTTGA GTTTCGCTTG GCAGGCCGGC
TCGGCCGCCA GCGTGGTGGT GGCCGCTCTG GTGGTCACGG TCGGGCTCGG ACTGATCGGC
ACGTGGTTGG CGCTCAACCA GAAACCAGCT TCCGTTTTGC GAAATTTATA G
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| Protein sequence | MTVLTETPPR IPSWSLPLRY ALREMRGGLN GFYVFIACIA LGVMAIAGVG SVAASLGDGL
AREGRTLLGG DAAFSLIQRE AMPNEVAFLR SRGDVSVAAT MRGMARTDDG RSALVELKAV
DGAYPLLGDL KLEPPMPVAD LLARRDDAFG AAADPALLAR LDLKIGDKVT IGSATFQIRS
AVAAEPDKLS GNIGFGPRFL ISDDGLRATQ LLQPGSLVRW TYRVRLPDNG TDDRAAQRLV
DDTRAALPQA GWEIRTRGNA SPQLERTITR FTQFLTLVGL AALVVGGVGV ANAVKSHIDR
RRDVIATLKA VGATGRDVFA IYLTQVIVLA LIGAVIGLAL GAAMPFALVG LFGQLLPLPV
VAALHPGELA LSLVYGLLTA LAFGLWPLAQ VRDVPVATLF REAATADSHR PRLRHVALIA
AVVAVLLAVV VGLAYDKRVA LAVIGATLAI FVLLRGVAAG LMAIARRLPR SRITMLRLAI
ANIHRPGALT PSVVLSLGLG LAVLVTVAQI DGNLRRQFSA ALPEKAPTFF FIDIPSSKTD
QFGTFLRQIA PNATLEDVPM LRGRIVAARG VRVEDLKPAP DAEWVLQSDR GLTYAADIPA
GSKVVEGRWW PKDYSGPPLV SFDKKLAQGL GLSIGDKVTV NVLGREITAT ISNLRSIDWQ
SLGINFVLVF SPDTFRGAPH THIATLTESG STPQSDAAVI KQVADRFPMV TSVRVREALE
TVGGVVSNLV LAVRGASAVT LISAILVLGG ALAAGHRHRV YDAVILKTLG ATRGRLIGAF
ALEYALIGLA TAAFAVLAGS AAAWLIVTRL MTLSFAWQAG SAASVVVAAL VVTVGLGLIG
TWLALNQKPA SVLRNL
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