Gene Rpal_0024 details

Gene Information

• Locus tag: Rpal_0024
• ID: 6407665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 24994
• End bp: 25662
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642709931
• Product: Glutathione S-transferase domain
• Protein accession: YP_001989062
• Protein GI: 192288457
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGACCG TCCATCATCT CAACAACTCC CGCTCGCAAC GCGTGCTGTG GCTCCTGGAG 
GAGCTCGACA CCCCTTACGA AATCAAGCGC TATCAACGTC AGCCGGACAT GATGGCGCCG 
AAGGAGCTGC GCGCCGTTCA TCCGCTCGGC AAGTCCCCGG TGATCACCGA CAACGGCAAC 
ACCATCGCCG AGTCCGGCGC CATCGTCGAA TACATCGTCG GCACCTATGG GAACGGCCGG 
CTGATCCCGC CGCCGAACAC CCCGGAGCGG CTGCGCTACA CCTACTGGCT GCACTATGCC 
GAGGGCTCGG CGATGCCGCC CCTGCTGCTG AAGCTGCTGT TCTCAATGAT GCCGCAGCGC 
GCCCCGGCGC TGGTGCGGCC ACTGGTCAAG ATGGTGGCGT CCGGCGCGCT GACCGGCTTC 
GTCGATCCGC AGCTCAAGCT GCACATGGAT TATTGGGAGA GCGAACTCGG CAAGGCCGCG 
TATTTCGCCG GCGACCAATT CACCGCCGCC GACATCCAGA TGAGCTTCCC TCTGGAAGCC 
GCCGCCTCAC GCGGCGGCCT CGATCAGCGC TACCCCAAGG CGCAGGCGTG GCTCGAACGC 
ATCCACGCCC GCCCTGCCTA CAACCGCGCG CTGGAAAAAG GCGGGCCGTA CGAAATCGGC 
AAGGCGTAG 

 

Protein sequence

MLTVHHLNNS RSQRVLWLLE ELDTPYEIKR YQRQPDMMAP KELRAVHPLG KSPVITDNGN 
TIAESGAIVE YIVGTYGNGR LIPPPNTPER LRYTYWLHYA EGSAMPPLLL KLLFSMMPQR 
APALVRPLVK MVASGALTGF VDPQLKLHMD YWESELGKAA YFAGDQFTAA DIQMSFPLEA 
AASRGGLDQR YPKAQAWLER IHARPAYNRA LEKGGPYEIG KA