Gene Cphamn1_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2534 
Symbol 
ID6376232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2704375 
End bp2705394 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content50% 
IMG OID642685012 
Productaminodeoxychorismate lyase 
Protein accessionYP_001960909 
Protein GI189501439 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.714245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGACA CGATTTCAAG CCGCATTGTC ATTCTCATTA CAAGCATAGC GATTCCTTCC 
CTTGCCTTTC TTGCCGCGTT TTTTTTTCTC CCCGGCTGGA ATGTCACCTG TGAAGGGTTT
GCTCAAAAGA AAATAATCGT GCACAGAGGC GCAAGCTTCC GCTCAATCCT TACATCACTT
CAGGACAACA GCGTACTAGG ACACCAGCGC CCCCTGATGA TCACTGCCGC AATTTTCCCT
GAACTACGCA ACATCAAGCC TGGGCGCTAC AGTATCCCTT CAGGCCTTTC AAACCATACG
CTCCTTACCT ATCTCCACAA TCATCCCCAG GATGAAGAAC GGGTCATGAT TCCCGAAGGA
GTCAGGAAGG AAAGAATCGC AGCTATTGTT TCCTCACATC TGGACATCGA CTCGCTATCC
TTCATAAACA GCGCGACAGA TAGAGCGCTG CTTGACTCGC TTGGTATTCA GGCCGGGTCT
TTTGAAGGCT ATTTTTTTCC CGGAACCTAC AATTTCCCCT GGGCAAGCAC ATCTGAAGAG
GTGATCAGAT TTCTTGTCGG CAGGTTCCAT ACATTTTATC ATGACAGCCT TAAAGCAGTT
TCATCCCTCA AAGGGCTCGA TGAGCTTGCA CTGCTTACAC TTGCCTCTAT TGTTGAGGCA
GAAACCCCGC TTGACGCAGA AAAGCCCCTC ATTGCAGGAG TGTATCTGAA CAGACTGAGA
AAAAACATGA AGATACAGGC TGACCCGACA GTGCAGTACG CTCTTGGAGG AGAGCCCCGG
AGACTTCTCT ACAAAGACCT TTCAATTGAT TCACCCTACA ACACCTACAA ATATAAAGGC
CTGCCTCCCG CACCGATAGG CAGTCCGGGA GCCGCCTCGA TCATGGCTGT CCTCTACCCG
GCAGAAACGG ATTACCTCTA CTTTGTCGCA ACCGGAAACG GCGGACACAA CTTTGCAAAA
ACCGCTGGAG AGCACGCAGA AAACGTTAAA AAGTACCGGA GAGCCCGCAG GAAACCATAA
 
Protein sequence
MRDTISSRIV ILITSIAIPS LAFLAAFFFL PGWNVTCEGF AQKKIIVHRG ASFRSILTSL 
QDNSVLGHQR PLMITAAIFP ELRNIKPGRY SIPSGLSNHT LLTYLHNHPQ DEERVMIPEG
VRKERIAAIV SSHLDIDSLS FINSATDRAL LDSLGIQAGS FEGYFFPGTY NFPWASTSEE
VIRFLVGRFH TFYHDSLKAV SSLKGLDELA LLTLASIVEA ETPLDAEKPL IAGVYLNRLR
KNMKIQADPT VQYALGGEPR RLLYKDLSID SPYNTYKYKG LPPAPIGSPG AASIMAVLYP
AETDYLYFVA TGNGGHNFAK TAGEHAENVK KYRRARRKP