Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2472 |
Symbol | |
ID | 6376167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2638206 |
End bp | 2639651 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642684949 |
Product | Alkaline phosphatase |
Protein accession | YP_001960847 |
Protein GI | 189501377 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1785] Alkaline phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000616832 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGGTT TCAGCCATAG GTTGATCAGT ATAGTGACCT GTATCGGTGC AGTTTTCTGT TTTGTCGCGT GCAGTACTTC GGGCATGGTT CAATCTGACA GGATCCCTGC TCAACAAGTT GTTCCCAGAT ATGTTTTTTA TTTCATCGGC GACGGCATGG GTGCTGCGCA GGTTAAGCTT GCAGAAAGTC TGCTTGAAAG TGGAGATTCT CTTGAAATGA CCTCTTTTCC GGCGTCCGGA ATGGCGGCGA CGCATGCAGA AAATCGCTAT ATCACCGGAT CTGCGGCGGC AGGAACCGCA CTTGCTACAG GGAAAAAGAC AACCATAGGG ACAATCGGAA AGAACGGGTC TCATACGGCC ACCCTGAAAA CCATGGCGGA GATGTCGAGG GATAGAGGTA TGCGGGTAGG CATTGTTTCC AGCGCCAGCA TCGATCACGC CACACCTGCC TGTTTTTATG CTCATGTTGA CAGCCGGAAA ATGTATGCTG AAATTGCAGC GCAAATGGCC TCGAGCGGTT TCGATTACTT TGGAGGAGGT TATGCCCTCG GTGATCTTGA TAACGGCAGG CCTCTGGGAA GACTGGTCGG GACAATGAAG GATAGCGGTT ATGCCGTAGT ACAGGGATGG GAGGCACTGG GAAAGGCGGT TACCGGCAGG AAATACTGGG CATTTGGCAG CTATGACGGT ACAGGCGCTC TCGGCTATGC TATCGACAGG GCTCCGGACG GGCTCACGCT TGCGGATTTT ACGAGGCATG GCATCAGACT CCTGGATAAT GATCGAGGAT TTTTCCTGAT GGTCGAAGGA GGAAAAATTG ACTGGGCAAG CCATGCGAAC GATGCGGCTA CAACAGCGCA TGAAGTACTG GAATTTGACG AGGCCGTCGC AGAAGCGGTC TCTTTTTACA GGCTTCATCC TGACGAAACA CTTATTGTTG TGACCGCTGA CCATGAATGC GGAGGGCTTG CGCTTGGAAA CAGAGCGACC GCCTATGAAA GCGATTTCAC TATTTTAAGT CACCAGAAGC TTTCTTTTCA GGCGTTTGCC GGTAAGGTCA AAACGTGGGT TGAACGGAAA AACGTCTCCT TTCCAATGGT TCTTGACAGC GCGAAAGTCT ATTTTGGCCT TGGGGATTCT GCACTTGATG CTTCGCTGAA GCTGAGTCCG CGGGAAAGGA CGGCGATCAG GGATGCCTGG AAAGCAAGCC GGGAAGGACG CGGCACTGCC CTTGCCTATG GATCAGGAGA TCCCCTTACC GTAACGCTCA TAGCGATATT AAACGAAAAG GCAGGGATAG GATGGACAAG TTCAGTGCAT ACCGCAGGAC TTGTTCCTGT TTTTGCCATA GGTCAGGGCG CTAACCGGTT CAACGGGGTG TATGACAATA CGGATATTGC AAAAAAACTT ATCGATCTGA TTGGACGTAT TGACAATTCG CGCTGA
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Protein sequence | MRGFSHRLIS IVTCIGAVFC FVACSTSGMV QSDRIPAQQV VPRYVFYFIG DGMGAAQVKL AESLLESGDS LEMTSFPASG MAATHAENRY ITGSAAAGTA LATGKKTTIG TIGKNGSHTA TLKTMAEMSR DRGMRVGIVS SASIDHATPA CFYAHVDSRK MYAEIAAQMA SSGFDYFGGG YALGDLDNGR PLGRLVGTMK DSGYAVVQGW EALGKAVTGR KYWAFGSYDG TGALGYAIDR APDGLTLADF TRHGIRLLDN DRGFFLMVEG GKIDWASHAN DAATTAHEVL EFDEAVAEAV SFYRLHPDET LIVVTADHEC GGLALGNRAT AYESDFTILS HQKLSFQAFA GKVKTWVERK NVSFPMVLDS AKVYFGLGDS ALDASLKLSP RERTAIRDAW KASREGRGTA LAYGSGDPLT VTLIAILNEK AGIGWTSSVH TAGLVPVFAI GQGANRFNGV YDNTDIAKKL IDLIGRIDNS R
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