Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2450 |
Symbol | |
ID | 6376145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2612010 |
End bp | 2613056 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684927 |
Product | transposase IS4 family protein |
Protein accession | YP_001960825 |
Protein GI | 189501355 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.348584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TCAACCCTCT CGGCCTTTTC GACGAACATT TCCTGCTTGA ACGCCTTACA AAGTTGAAAG ATCCTCTCGT CAAGCTCAAT GACCATATCG ACTGGAAGAT CTTTGCTCCG ATTCTTGATG TTGTCTTCAA TAAACCCAAG AACAGCAACA ATGTTGGCAG GCCACCGTTT GATCGGCTGA TGATGTTCAA GCTCATGATT CTCCAGAGCC TGTACAATCT GTCGGATGAC CAGATGGAGT ACCAGATTAC AGACCGATTG AGCTTCAAAC GTTTCTTGAG CCTGAAATCA AGCGACCGGG TTCCGGACAG CAAGACAATC TGGAAGTTCC GTGAAACGCT TATTCAGGAA GAGGTGATCG AAGCCCTGTT TTATCGATTC AATCAGGCTC TTGATGATCA GTCCATCTTT GCAAACACCG GCCAGATCGT TGATGCCAGC TTCGTTGAAG TGCCTAAACA GCGCAATACC CGTGATGAAA ACAAAGAGGT CAAAGCAGGA AAAACCCCTG ACACCTGGAA GACGAAGCCG AACAAGCTGC GTCAGAAAGA CCGTGATGCC CGTTGGACCA AGAAGAACAA AATGAGTTTT TACGGCTATA AAAACCACAT CAAGGTCGAC AAGGGGACGA AACTCATCAG TTCCTACATG GTAACCGACG CATCAGTCCA CGACTCCCAG GAGCTTGAAA CTCTTATCGA CAAAGACAAC GCCGGCCAGA AGCTTTACGC TGATTCTGCC TATACCGGAC AGGAGAAGAG CATCGAAGGG TGCGGCATGG CGAACGAAGT CCAAGAGAAA GGTTCCCGGT ACCGTGCGCT CACCGAAACA CAAAAGGCCT CGAATCGTGA GAAAGCCAGT CACCGTGCCA GAGTCGAACA CATCTTCGGC TACCTGACCA ATTCGATGAA AGCCATGTAC ATCAGAACCA TCGGTTATGC GAGGGCAACA GCCAAGATCG GCCTGACCAA TCTGACGTAC AACATGATGA GATGCACGCA GTTGAACAAG AAAGTCTATA ACGTCTTCTT GGGATAA
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Protein sequence | MKNINPLGLF DEHFLLERLT KLKDPLVKLN DHIDWKIFAP ILDVVFNKPK NSNNVGRPPF DRLMMFKLMI LQSLYNLSDD QMEYQITDRL SFKRFLSLKS SDRVPDSKTI WKFRETLIQE EVIEALFYRF NQALDDQSIF ANTGQIVDAS FVEVPKQRNT RDENKEVKAG KTPDTWKTKP NKLRQKDRDA RWTKKNKMSF YGYKNHIKVD KGTKLISSYM VTDASVHDSQ ELETLIDKDN AGQKLYADSA YTGQEKSIEG CGMANEVQEK GSRYRALTET QKASNREKAS HRARVEHIFG YLTNSMKAMY IRTIGYARAT AKIGLTNLTY NMMRCTQLNK KVYNVFLG
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