Gene Cphamn1_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2439 
Symbol 
ID6376134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2601309 
End bp2602631 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content48% 
IMG OID642684917 
ProductATPase AAA-2 domain protein 
Protein accessionYP_001960815 
Protein GI189501345 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTT CAGATACAAG ACAAAGATTG GAGGATATCG AAAAGCAGCT TGCCGACCTC 
AACGAAGAGC AAAGAAGGAT CCAGGCTCGC TGGGATGCTG AAAAAGGTCT TGTTCAGGAG
TCCAGAAGTC TGAAATCGAA ACTGGAGGAT CTGAGACATC AGGCCGAAGA GTATGAACGA
AGCGGCGACT ATGGCAAAGT GGCAGAGATT CGTTATAGCA GCATTGCGGA TATTGAAAAA
CAGATTGAAG AAAACAAACT GAAAATAGAG GAGAAACAGG CTTCCGGCGA ACTGATCATG
AAAGAGGAGA TTGACGCCGG GGATATTGCT GATATTGTCT CCAAATGGAC CGGAATACCG
GTCAGCAAGA TGCTGCAGTC GGAACGACAA AAGCTTCTGC TCATTGATCA AGAACTGCAT
AAAAGGGTCA TCGGTCAGGA TAAAGCTGTG CAGGCGGTCA GCGAAGCGGT CAAGCGATCA
CGTGCCGGCA TGGGGGATGA AAAAAGGCCT ATCGGCTCAT TTATTTTCCT CGGGCCGACA
GGCGTCGGAA AAACCGAACT TGCCCGTACC CTCGCGGAGT ACCTCTTTGA CGATGAAGAC
GCAATGATAC GCATCGATAT GAGCGAATAT ATGGAATCGC ACTCTGTCAG CAGGCTTGTA
GGCGCACCTC CGGGATACAT CGGCTACGAA GAAGGTGGGC AACTCACAGA GGCTGTCCGG
AGAAGACCTT TTTCAGTTGT TCTTCTTGAC GAAATCGAAA AAGCTCATCC AGACGTTTTC
AACATTCTTC TGCAGATTCT CGATGACGGG AGATTGACCG ACAGCAAGGG ACACACGGTG
AATTTCAAAA ACACGATCAT CATCATGACA AGCAATATCG GCGCCCAGCT TATCCAGAGC
GAAATGGAAA AGATGGACGG TGAAAACCGT GATGCTGTTC TGGAAACCCT TCAGGATAAG
CTTTTCCTGC TCCTGAAACA GCAGGTCAAA CCCGAATTTC TCAATCGTAT CGATGAAGTG
ATCCTCTTTA CGCCATTGAC CAGAAAAGAT CTTGAAAAAA TCGTAACCAT TCAGTTCAAC
AGTATAAACA AGCTTGCCCT GCGTCAGAAT ATCTCCCTTC ATCTGGATGA TAGCGCCCTC
ACCTGGCTTT CCAACGCGGG ATTTGACCCT GCTTTCGGAG CAAGACCGCT GAAACGCGTC
ATGCAGCGCA GCATCACCAA CAAGCTTTCG GAAATGATTC TTGAAGGAAC AGTCAGGGAA
GGAGATTCAG TACAGGTCAC CGTTGAGCAT GGAGAGCTCT CTCTTGTAAA AACAGCCTCC
TGA
 
Protein sequence
MNSSDTRQRL EDIEKQLADL NEEQRRIQAR WDAEKGLVQE SRSLKSKLED LRHQAEEYER 
SGDYGKVAEI RYSSIADIEK QIEENKLKIE EKQASGELIM KEEIDAGDIA DIVSKWTGIP
VSKMLQSERQ KLLLIDQELH KRVIGQDKAV QAVSEAVKRS RAGMGDEKRP IGSFIFLGPT
GVGKTELART LAEYLFDDED AMIRIDMSEY MESHSVSRLV GAPPGYIGYE EGGQLTEAVR
RRPFSVVLLD EIEKAHPDVF NILLQILDDG RLTDSKGHTV NFKNTIIIMT SNIGAQLIQS
EMEKMDGENR DAVLETLQDK LFLLLKQQVK PEFLNRIDEV ILFTPLTRKD LEKIVTIQFN
SINKLALRQN ISLHLDDSAL TWLSNAGFDP AFGARPLKRV MQRSITNKLS EMILEGTVRE
GDSVQVTVEH GELSLVKTAS