| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2331 |
|---|
| Symbol | |
|---|
| ID | 6376026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2502859 |
|---|
| End bp | 2505033 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642684815 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001960713 |
|---|
| Protein GI | 189501243 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA TGCTGTTCCC GACGAAGATC CTCTGGGAAG AGGACAGAAT CAAAACCCCG
ACTGTCCTGC AGATGGAAGC GGTGGAGTGC GGTGCGGCCT CGCTCGGCAT GATTCTGGCT
TATTTCGGAA AGTATGTTCC GCTCGAGGAA CTCAGGGTCG AGTGCGGGGT GTCGCGCGAC
GGCAGCAAGG CGAGCAGCCT CATTGCCGCA GGGAAACGGT ACGGGCTGGA ATCGAAAGGC
GCACGGCTTG ACATTGACGA CCTCCACCGT AAGCCGCTGC CGATGATCCT GTTCTGGAAC
ATGTACCACT TTGTGGTGTT CGAGGGCTAC CGGAAAGGCA TCTACTACAT CAACGACCCT
GCTTCGGGTC AGCGGAAGGT GAGTGCGCAG GAGTTCAGCG AGTCCTATTC GGGTGTGGCG
CTCACGTTCG AAAAGACCGA TGCGTTCCAG CCGGGCGGCA GGCCGTTCAG TCTTGCCGGC
GCTCTGAAAA AAAGGATGCC GGGTCTCGAG CGGGCGCTCA CCTATATCGT CCTCGCAAGC
CTGCTGCTTG TCATCCCGGG GCTTGTCGTG CCCTCGTTCC TTCGCATCTT CATCGACTAT
GTTCTGGTGC AGGGGGCCAC GGACTGGCTG CGCCCGCTGC TGATCGGCAT GCTGCTCACC
GCTCTCCTGC AGGGCGTGCT TACCTGGCTG AAGCAGTACT ACCTCCTCCG GGCCGAAACC
AAGCTCGCCC TCACTTCTTC AGCGAAGTTC TTCAACCATG TCTTCGCCAT GCCCATGCGC
TTCTTCACGA TGCGCCAGGC CGGTGAAATC TCGAACCGTG TGCAGCTCAA CGACCAGGTC
GCCACCCTGG TGGCAGGGGA CCTTACGGCC AATGCACTCA ACTTTCTCTT GATCGCGTTC
TATGCGCTCC TGATGTTCCG CTACGATACC GTCCTTACCC TCGGAGCCAT CCTCATCGCC
GTCGTCAATG CATCGGCCCT GTTCTATGTG TCGCGCAAGC GCGTCGTGCT CAACCAGAAG
TTCCAGCAGG ATTATGGCAA GCTCATGGGA ACCACTTTCT ACGGCATCAA GACCATCGAA
AGCCTCAAGG CCTCGGGCTC CGAGCCGGAC TTCTTCGCCC GCTGGTCGGG GCTCTTCGCC
AACATGGTCA ACGGCCAGCA GCAGCTGCAG GTCGCCACGG TGTTCCTGCT CGCCCTGCCT
CCGTTCCTTC AGTCGTTCGG CAACATCGCC ATTCTCTCGG TCGGCGGTCT CAGGGTGATG
GAAGGGCAGC TGACCATGGG TATGCTCATC GCGTTCCAGA GCCTGCTCAT GTCGTTCCTT
GCTCCGGTGA ACGAAATGGT CACCCTCGGC CAGAAACTGC AGGACGCCGA GGGCAACATG
CAGCGGCTTG ACGACGTGAT GGACAACGAT GTGGAACTCG AAACCGATGA AGACGACGAT
GAGGAGCATC AGCCGCTCGA GGGCCATATC GAGCTGCGCG ACATCACCTT CGGCTACAAT
GTGCTGGAAG CACCGCTCAT CGAGAACTTT TCCTTGAAGC TCGAGCCGGG CCAGCGGGTT
GCGCTGGTCG GCGGGTCGGG GTCGGGGAAA TCGACGGTGT CGAAGCTGGT TGCGGGGTTG
TACGAACCCT GGTCGGGGGA ACTGCTGTTT GACGGCATCC CACGCCGGCA GCTGCCGCGC
AGACGGGTTG CGGCATCGGT CGGCATGGTC GATCAGGAGA TCAGCCTGTT TGAAGGCAGC
ATCGCCGAAA ATATCTCCAT GTGGGATGGA ACCATGCTGC AGGGGGAGAT TGAACGGGCA
GCCCGGGATG CGGCAATCGA TGAGGTAATC TCTTCACGCA CCGGCGGCTA TCAGGCAAAT
CTGTCGGAAG GCGGGTCGAA CTTCAGCGGC GGACAGCGCC AGAGAATCGA AATCGCAAGG
GCGCTTGCCT CGAACCCCTC GATCTTGATT CTTGATGAGG CCACCAGTGC CCTTGATCCT
ACGACGGAAA AGCGTATTGA CGAAAACATC CGGAAGCGGG GGTGCACCTG CCTGATCGTG
GCACACCGGC TGAGCACCAT CCGCGACTGT GATGAAATCA TTGTACTCGA ATACGGAAAG
GTTAAGGAAC GCGGTACCCA CCAGTCACTC ATGGCCCTTG GCGGGGTCTA TGCCGGACTC
ATAAAAACAG GATGA
|
|---|
| Protein sequence | MSFMLFPTKI LWEEDRIKTP TVLQMEAVEC GAASLGMILA YFGKYVPLEE LRVECGVSRD
GSKASSLIAA GKRYGLESKG ARLDIDDLHR KPLPMILFWN MYHFVVFEGY RKGIYYINDP
ASGQRKVSAQ EFSESYSGVA LTFEKTDAFQ PGGRPFSLAG ALKKRMPGLE RALTYIVLAS
LLLVIPGLVV PSFLRIFIDY VLVQGATDWL RPLLIGMLLT ALLQGVLTWL KQYYLLRAET
KLALTSSAKF FNHVFAMPMR FFTMRQAGEI SNRVQLNDQV ATLVAGDLTA NALNFLLIAF
YALLMFRYDT VLTLGAILIA VVNASALFYV SRKRVVLNQK FQQDYGKLMG TTFYGIKTIE
SLKASGSEPD FFARWSGLFA NMVNGQQQLQ VATVFLLALP PFLQSFGNIA ILSVGGLRVM
EGQLTMGMLI AFQSLLMSFL APVNEMVTLG QKLQDAEGNM QRLDDVMDND VELETDEDDD
EEHQPLEGHI ELRDITFGYN VLEAPLIENF SLKLEPGQRV ALVGGSGSGK STVSKLVAGL
YEPWSGELLF DGIPRRQLPR RRVAASVGMV DQEISLFEGS IAENISMWDG TMLQGEIERA
ARDAAIDEVI SSRTGGYQAN LSEGGSNFSG GQRQRIEIAR ALASNPSILI LDEATSALDP
TTEKRIDENI RKRGCTCLIV AHRLSTIRDC DEIIVLEYGK VKERGTHQSL MALGGVYAGL
IKTG
|
|---|
| |