Gene Cphamn1_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2306 
Symbol 
ID6376001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2477777 
End bp2478916 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content53% 
IMG OID642684793 
Productglycosyl transferase group 1 
Protein accessionYP_001960691 
Protein GI189501221 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.455622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0637665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGCCC TGCATGTTGC CCTTGTCAGT CCTTTTTTTC CTCTCAAAGG AGGCATAGCC 
CGTTTCAGCA CAACGTTACG CAACGTTCTC CTGAAACGAG GACGAAAGGT AGACGGGATT
TCTTTCAAAC GGCTCTACCC CGGGATTCTG CTGCGAGGAA AAGCTGTCTT TGAGCCCGGT
GCTTCCATCG AGCCTGAAGA CGGGGTTCTT CCTCTGATCG ATACGCTCAA TCCTTTGACG
TGGTTTACAA CGGCCCGCTC TATCAGACGG ATACAGCCGG AAATCATGAT CTGCGCATAC
TGGCTCGGGC CACTCTCGCC GATTTATTGG CTGTTACAAC GCATTACCGG TATAAAAATG
ATCGTGTTGA TGCATAATTA CACATCGCAT GAGCGTTTTT TTGCTGAAAA GAAATTCCGT
GATCTTCTCC TGAAAGAGGC TGATGGTGTT GTGACGCTTT CTGAATATGT TGCCCGACAG
GTGAAGAATT CCTATCCTGA GGTGCCGGTC AAGGCGCTGT TTCATCCTGT CTACAGCCCG
GGCGGCACAT TGATTTCGCG TCAGGACGCG TGCCGCACGC TCGGGATTGA TCCACAAGAG
CGTGTGCTTC TGTTTTTCGG CTATGTCAGG GAGTACAAGG GGCTCGATCT TCTTGTTGAC
GCCATGCCTG AAGTGGTTCG TCGCCATCCA GGTACCCGTC TGGTTATCGC CGGGGAGTTT
TATTATGGAG AGAAGCTGTT CCGTGAGCGT ATAGAGCAGC TTGGTGTCGG TTGCCGGGTA
AGCGTGTATC CAGGGTTTGT CCCTCCGGAA CGGATGCGGC TTTTTTTCTC TGTTGCCGAT
GCAGCGGTGC TTCCCTACAG GGAGGCCTCA CAGTCCGGTG TCGTACAGCA GGCTTACGGG
TTCGGGTGTC CCGTTATCGT TTCCGGCATG GGTGGGCTTC CTGAGGCGGT TGACGAGGGG
AAGACAGGGG TTGTGGTCCG GGATCTTGAT CCTCTGTCTC TGGCGGATGG TATCTGTTCA
TTTCTTGAGA ACAGCAAAGC GGTTCCCTAC CGGGAAAATG TTGATCGATA TGCCGCTCAT
TTTTCATGGG AGGTTTTTGC GGAGAAGCTG GAGGAATTCA CGCTGGAGGT GGTCGCATGA
 
Protein sequence
MKALHVALVS PFFPLKGGIA RFSTTLRNVL LKRGRKVDGI SFKRLYPGIL LRGKAVFEPG 
ASIEPEDGVL PLIDTLNPLT WFTTARSIRR IQPEIMICAY WLGPLSPIYW LLQRITGIKM
IVLMHNYTSH ERFFAEKKFR DLLLKEADGV VTLSEYVARQ VKNSYPEVPV KALFHPVYSP
GGTLISRQDA CRTLGIDPQE RVLLFFGYVR EYKGLDLLVD AMPEVVRRHP GTRLVIAGEF
YYGEKLFRER IEQLGVGCRV SVYPGFVPPE RMRLFFSVAD AAVLPYREAS QSGVVQQAYG
FGCPVIVSGM GGLPEAVDEG KTGVVVRDLD PLSLADGICS FLENSKAVPY RENVDRYAAH
FSWEVFAEKL EEFTLEVVA