Gene Cphamn1_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2232 
Symbol 
ID6375926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2416809 
End bp2418014 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content50% 
IMG OID642684719 
Productaminotransferase class V 
Protein accessionYP_001960618 
Protein GI189501148 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATAC AACGGGTTTA TCTTGATAAC AATGCCACAA CTCCGCTTCA TCCTGAGGTG 
AAAAGGGAGA TGGTAGAGGC GATGGACATG TTCGGGAATC CATCGAGTAT GCATGCTTTC
GGAAGGGAAG CCAGGGCAAA TGTAGAGCAT GCAAGAAAAA CCGTGGCAGA GTTCATCGGG
GCGCACGAGG ATGAAATCGT CTTTGTGGGG AGCGGTTCAG AGGCCAATAA TACAGTTCTT
TCCCTGTTCG CCTGTGCCTC AAACCTTTGC CTGCCCGGTT TTAAAGCCAG GACAACGATC
ATTACTTCCA GAATTGAGCA CCCTTGCGTG CTGGAAACCT CTGAGTGTCT TGCTCACAAG
GGTACAACCG TCAAGTTTCT TGATGTTGAC GAGTACGGCA GGATCGATAT GGATCAGTTG
AAGGAGTACC TTACCGATGA TGTCGGTCTG GTTTCCGTGA TGACGGCAAA TAACGAAATC
GGCACGATTC AGGACATCGC CGAAATTACC CGGCTGGCTC ATGAAAACGG TTCATTGATG
CACACCGACG CGGTTCAGGC AGTCGGGAAA ATGCCTGTGA ACGTCAATGA CCTGGGCGTT
GATTTTCTGA CCATGAGCGC GCACAAGATT TATGGTCCGA AAGGTATCGG GGCGCTTTTT
GTGCGAAAAG GCACTCCATA TTGTCCGTTT ATTCGCGGTG GACATCAGGA GAAGGGGCGA
AGGGCAGGAA CGGAAAATAC TCTTGGCATC ATGGGAATGG CCAAGGCGGT TGAAATGCGT
GCACTTGAGA TGGAAGAGGA GGCAAAACGT TTTGCCGTGA TGAAGGAGGC TCTGAAAAAA
GGTATAGAAG AGTCCATCGA TGATGTCTTT TTTAACGGTC ATCCGACCAA AAGCATGCCG
AATACCCTGA ACGTTTCCTT TCCAGGTGCT GAAGGGGAAG CGATTCTGCT CTATCTCGAT
CTCGAAGGGA TTGCCGTTTC TACCGGCTCA GCCTGTGCTT CGGGTTCCCT CGATCCTTCG
CATGTACTGC TTGCAACCGG TTCGAATGCG GAACGGGCTC ATGGTTCGAT ACGAATAAGC
ATGGGAAGGG AGACAACAAT GGATGAAATC ACCTATCTGC TCGAGGTGCT TCCCGGCATC
ATCGGGAGAA TAAGAACAAT GTCAACAGCA TATATAAAGG GAGAAGAACA TGTTGCAGCC
AAGTGA
 
Protein sequence
MGIQRVYLDN NATTPLHPEV KREMVEAMDM FGNPSSMHAF GREARANVEH ARKTVAEFIG 
AHEDEIVFVG SGSEANNTVL SLFACASNLC LPGFKARTTI ITSRIEHPCV LETSECLAHK
GTTVKFLDVD EYGRIDMDQL KEYLTDDVGL VSVMTANNEI GTIQDIAEIT RLAHENGSLM
HTDAVQAVGK MPVNVNDLGV DFLTMSAHKI YGPKGIGALF VRKGTPYCPF IRGGHQEKGR
RAGTENTLGI MGMAKAVEMR ALEMEEEAKR FAVMKEALKK GIEESIDDVF FNGHPTKSMP
NTLNVSFPGA EGEAILLYLD LEGIAVSTGS ACASGSLDPS HVLLATGSNA ERAHGSIRIS
MGRETTMDEI TYLLEVLPGI IGRIRTMSTA YIKGEEHVAA K